-ctat genome lib [/tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.gqDb8TiDdR/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary -sample contains 247632869 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir -J /tmp/nxf.gqDb8TiDdR/tih_rna_sample_00709_B23MVV7LT4_1.Chimeric.out.junction -O /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.gqDb8TiDdR/tih_rna_sample_00709_B23MVV7LT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=66666.67/min [30000], rate=48648.65/min [40000], rate=43636.36/min [50000], rate=50000.00/min [60000], rate=58064.52/min [70000], rate=60000.00/min [80000], rate=60759.49/min [90000], rate=62068.97/min [100000], rate=63157.89/min [110000], rate=58928.57/min [120000], rate=55384.62/min [130000], rate=52702.70/min [140000], rate=51219.51/min [150000], rate=50561.80/min [160000], rate=50000.00/min [170000], rate=45535.71/min [180000], rate=44262.30/min [190000], rate=42696.63/min [200000], rate=41522.49/min [210000], rate=39622.64/min [220000], rate=36065.57/min [230000], rate=34936.71/min [240000], rate=33027.52/min [250000], rate=30991.74/min [260000], rate=30291.26/min [270000], rate=28825.62/min [280000], rate=28915.66/min [290000], rate=27444.79/min [300000], rate=26200.87/min [310000], rate=26345.61/min [320000], rate=26482.76/min [330000], rate=26121.37/min [340000], rate=26153.85/min [350000], rate=26415.09/min [360000], rate=26699.63/min [370000], rate=26876.51/min [380000], rate=27078.38/min [390000], rate=27368.42/min [400000], rate=27586.21/min [410000], rate=27891.16/min [420000], rate=28062.36/min [430000], rate=27476.04/min [440000], rate=27414.33/min [450000], rate=27607.36/min [460000], rate=27490.04/min [470000], rate=27592.95/min [480000], rate=27799.23/min [490000], rate=27528.09/min [500000], rate=27198.55/min [510000], rate=27248.44/min [520000], rate=27488.99/min [530000], rate=27700.35/min [540000], rate=27955.13/min [550000], rate=28181.04/min [560000], rate=28402.37/min [570000], rate=28643.22/min [580000], rate=28903.65/min [590000], rate=29159.80/min [600000], rate=29363.78/min [610000], rate=29421.22/min [620000], rate=29712.46/min [630000], rate=29976.21/min [640000], rate=30260.05/min [650000], rate=30516.43/min [660000], rate=30793.16/min [670000], rate=31066.46/min [680000], rate=30862.33/min [690000], rate=30826.51/min [700000], rate=31088.08/min [710000], rate=31049.56/min [720000], rate=30945.56/min [730000], rate=30866.81/min [740000], rate=30833.33/min [750000], rate=30991.74/min [760000], rate=31275.72/min [770000], rate=31557.38/min [780000], rate=31815.09/min [790000], rate=32092.08/min [800000], rate=32345.01/min [810000], rate=32617.45/min [820000], rate=32931.73/min [830000], rate=33222.15/min [840000], rate=33510.64/min [850000], rate=33797.22/min [860000], rate=34059.41/min [870000], rate=34342.11/min [880000], rate=34622.95/min [890000], rate=34924.79/min [900000], rate=34861.20/min [910000], rate=34821.43/min [920000], rate=34782.61/min [930000], rate=34809.73/min [940000], rate=34814.81/min [950000], rate=34819.79/min [960000], rate=34845.74/min [970000], rate=34871.18/min [980000], rate=34896.14/min [990000], rate=34900.12/min [1000000], rate=34985.42/min [1010000], rate=35008.67/min [1020000], rate=35051.55/min [1030000], rate=34994.34/min [1040000], rate=34494.20/min [1050000], rate=34072.47/min [1060000], rate=33757.96/min [1070000], rate=33789.47/min [1080000], rate=33838.12/min [1090000], rate=33868.46/min [1100000], rate=33933.16/min [1110000], rate=34014.30/min [1120000], rate=34094.37/min [1130000], rate=34156.17/min [1140000], rate=34234.23/min [1150000], rate=34328.36/min [1160000], rate=34472.51/min [1170000], rate=34564.25/min [1180000], rate=34621.03/min [1190000], rate=34693.88/min [1200000], rate=34765.81/min [1210000], rate=34853.58/min [1220000], rate=34957.02/min [1230000], rate=35059.38/min [1240000], rate=35077.79/min [1250000], rate=35030.36/min [1260000], rate=35048.68/min [1270000], rate=35147.60/min [1280000], rate=35245.53/min [1290000], rate=35326.34/min [1300000], rate=35422.34/min [1310000], rate=35501.36/min [1320000], rate=35611.51/min [1330000], rate=35704.70/min [1340000], rate=35812.92/min [1350000], rate=35920.18/min [1360000], rate=35978.84/min [1370000], rate=36100.13/min [1380000], rate=36236.32/min [1390000], rate=36355.71/min [1400000], rate=36474.16/min [1410000], rate=36575.88/min [1420000], rate=36692.51/min [1430000], rate=36808.24/min [1440000], rate=36938.86/min [1450000], rate=37068.60/min [1460000], rate=37197.45/min [1470000], rate=37325.43/min [1480000], rate=37452.55/min [1490000], rate=37578.81/min [1500000], rate=37688.44/min [1510000], rate=37813.02/min [1520000], rate=38000.00/min [1530000], rate=38107.10/min [1540000], rate=38245.03/min [1550000], rate=38334.71/min [1560000], rate=38360.66/min [1570000], rate=38464.68/min [1580000], rate=38599.35/min [1590000], rate=38717.53/min [1600000], rate=38850.67/min [1610000], rate=38983.05/min [1620000], rate=39161.97/min [1630000], rate=39340.31/min [1640000], rate=39486.36/min [1650000], rate=39647.58/min [1660000], rate=39792.25/min [1670000], rate=39920.32/min [1680000], rate=40063.59/min [1690000], rate=40206.19/min [1700000], rate=40348.10/min [1710000], rate=40505.33/min [1720000], rate=40645.92/min [1730000], rate=40753.83/min [1740000], rate=40893.07/min [1750000], rate=41031.65/min [1760000], rate=41169.59/min [1770000], rate=41306.88/min [1780000], rate=41459.63/min [1790000], rate=41627.91/min [1800000], rate=41795.67/min [1810000], rate=41930.50/min [1820000], rate=42080.92/min [1830000], rate=42247.02/min [1840000], rate=42412.60/min [1850000], rate=42610.36/min [1860000], rate=42775.01/min [1870000], rate=42922.72/min [1880000], rate=43069.87/min [1890000], rate=43216.46/min [1900000], rate=43362.50/min [1910000], rate=43507.97/min [1920000], rate=43652.90/min [1930000], rate=43780.72/min [1940000], rate=43841.81/min [1950000], rate=43918.92/min [1960000], rate=43995.51/min [1970000], rate=44088.03/min [1980000], rate=44179.99/min [1990000], rate=44287.83/min [2000000], rate=44378.70/min [2010000], rate=44469.03/min [2020000], rate=44575.21/min [2030000], rate=44680.85/min [2040000], rate=44785.95/min [2050000], rate=44906.90/min [2060000], rate=45027.32/min [2070000], rate=45147.22/min [2080000], rate=45283.02/min [2090000], rate=45401.88/min [2100000], rate=45520.23/min [2110000], rate=45638.07/min [2120000], rate=45771.86/min [2130000], rate=45905.17/min [2140000], rate=46038.01/min [2150000], rate=46170.37/min [2160000], rate=46318.80/min [2170000], rate=46433.67/min [2180000], rate=46581.20/min [2190000], rate=46711.70/min [2200000], rate=46841.73/min [2210000], rate=46954.67/min [2220000], rate=47100.42/min [2230000], rate=47229.09/min [2240000], rate=47340.61/min [2250000], rate=47551.95/min [2260000], rate=47696.10/min [2270000], rate=47839.83/min [2280000], rate=47915.94/min [2290000], rate=48041.96/min [2300000], rate=48184.36/min [2310000], rate=48326.36/min [2320000], rate=48434.24/min [2330000], rate=48575.40/min [2340000], rate=48699.27/min [2350000], rate=48805.82/min [2360000], rate=48911.92/min [2370000], rate=49051.40/min [2380000], rate=49173.55/min [2390000], rate=49244.51/min [2400000], rate=49348.87/min [2410000], rate=49469.72/min [2420000], rate=49556.31/min [2430000], rate=49659.40/min [2440000], rate=49762.07/min [2450000], rate=49898.17/min [2460000], rate=50016.94/min [2470000], rate=50169.26/min [2480000], rate=50355.33/min [2490000], rate=50490.03/min [2500000], rate=50607.29/min [2510000], rate=50672.95/min [2520000], rate=50789.39/min [2530000], rate=50922.51/min [2540000], rate=51038.18/min [2550000], rate=51170.57/min [2560000], rate=51354.06/min [2570000], rate=51554.66/min [2580000], rate=51686.14/min [2590000], rate=51800.00/min [2600000], rate=51913.48/min [2610000], rate=51992.03/min [2620000], rate=52087.48/min [2630000], rate=52217.07/min [2640000], rate=52311.76/min [2650000], rate=52388.80/min [2660000], rate=52465.48/min [2670000], rate=52593.57/min [2680000], rate=52669.51/min [2690000], rate=52745.10/min [2700000], rate=52820.35/min [2710000], rate=52946.92/min -building interval tree based on /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=46153.85/min [20000], rate=48000.00/min [30000], rate=46153.85/min [40000], rate=46153.85/min [50000], rate=46875.00/min [60000], rate=42857.14/min [70000], rate=42000.00/min [80000], rate=43243.24/min [90000], rate=43902.44/min [100000], rate=45112.78/min [110000], rate=46478.87/min [120000], rate=47682.12/min [130000], rate=49056.60/min [140000], rate=50000.00/min [150000], rate=49450.55/min [160000], rate=47524.75/min [170000], rate=45535.71/min [180000], rate=45188.28/min [190000], rate=46341.46/min [200000], rate=47244.09/min [210000], rate=48461.54/min [220000], rate=49624.06/min [230000], rate=50735.29/min [240000], rate=51245.55/min [250000], rate=52083.33/min [260000], rate=52881.36/min [270000], rate=53820.60/min [280000], rate=54545.45/min [290000], rate=54205.61/min [300000], rate=54216.87/min [310000], rate=53757.23/min [320000], rate=53481.89/min [330000], rate=53369.27/min [340000], rate=53125.00/min [350000], rate=53030.30/min [360000], rate=52941.18/min [370000], rate=52983.29/min [380000], rate=52900.23/min [390000], rate=52584.27/min [400000], rate=52631.58/min [410000], rate=52789.70/min [420000], rate=52282.16/min [430000], rate=52332.66/min [440000], rate=51063.83/min [450000], rate=49907.58/min [460000], rate=48849.56/min [470000], rate=47959.18/min [480000], rate=47682.12/min [490000], rate=48117.84/min [500000], rate=48465.27/min [510000], rate=48803.83/min [520000], rate=49133.86/min [530000], rate=49609.98/min [540000], rate=50000.00/min [550000], rate=50304.88/min [560000], rate=50832.07/min [570000], rate=51274.36/min [580000], rate=51708.77/min [590000], rate=52212.39/min [600000], rate=52708.64/min [610000], rate=53197.67/min [620000], rate=53602.31/min [630000], rate=54000.00/min [640000], rate=54390.93/min [650000], rate=54852.32/min [660000], rate=54470.43/min [670000], rate=53671.56/min [680000], rate=53403.14/min [690000], rate=52738.85/min [700000], rate=51157.13/min [710000], rate=50956.94/min [720000], rate=50704.23/min [730000], rate=50402.76/min [740000], rate=48952.59/min [750000], rate=48387.10/min [760000], rate=48202.96/min [770000], rate=48074.92/min [780000], rate=47950.82/min [790000], rate=47542.63/min [800000], rate=47477.74/min [810000], rate=47460.94/min [820000], rate=47536.23/min [830000], rate=47519.08/min [840000], rate=47592.07/min [850000], rate=47574.63/min [860000], rate=47645.43/min [870000], rate=47671.23/min [880000], rate=47739.60/min [890000], rate=47678.57/min [900000], rate=47535.21/min [910000], rate=47519.58/min [920000], rate=47668.39/min [930000], rate=47733.11/min [940000], rate=47675.40/min [950000], rate=47068.54/min [960000], rate=47020.41/min [970000], rate=47087.38/min [980000], rate=47153.17/min [990000], rate=47255.37/min [1000000], rate=47355.96/min [1010000], rate=47269.89/min [1020000], rate=47222.22/min [1030000], rate=47392.64/min [1040000], rate=47488.58/min [1050000], rate=47583.08/min [1060000], rate=47462.69/min [1070000], rate=47032.97/min [1080000], rate=46652.27/min [1090000], rate=46153.85/min [1100000], rate=45611.61/min [1110000], rate=45121.95/min [1120000], rate=44651.16/min [1130000], rate=44371.73/min [1140000], rate=44357.98/min [1150000], rate=44458.76/min [1160000], rate=44558.26/min [1170000], rate=44713.38/min [1180000], rate=44866.92/min [1190000], rate=45018.92/min [1200000], rate=45141.07/min [1210000], rate=45290.08/min [1220000], rate=45437.62/min [1230000], rate=45583.69/min [1240000], rate=45756.46/min [1250000], rate=45955.88/min [1260000], rate=46125.69/min [1270000], rate=46322.19/min [1280000], rate=46517.26/min [1290000], rate=46739.13/min [1300000], rate=46931.41/min [1310000], rate=47150.57/min [1320000], rate=47340.11/min [1330000], rate=47556.62/min [1340000], rate=47545.83/min [1350000], rate=47423.89/min [1360000], rate=47140.38/min [1370000], rate=46837.61/min [1380000], rate=46621.62/min [1390000], rate=46384.87/min [1400000], rate=46204.62/min [1410000], rate=46003.26/min [1420000], rate=45880.45/min [1430000], rate=45735.61/min [1440000], rate=44813.28/min [1450000], rate=44050.63/min [1460000], rate=43625.50/min [1470000], rate=43555.56/min [1480000], rate=43465.49/min [1490000], rate=43440.23/min [1500000], rate=43436.29/min [1510000], rate=43328.55/min [1520000], rate=43325.42/min [1530000], rate=43322.32/min [1540000], rate=43339.59/min [1550000], rate=43336.44/min [1560000], rate=43353.40/min [1570000], rate=43370.17/min [1580000], rate=43406.59/min [1590000], rate=43422.85/min [1600000], rate=43438.91/min [1610000], rate=43474.35/min [1620000], rate=43509.40/min [1630000], rate=43563.47/min [1640000], rate=43597.70/min [1650000], rate=43631.56/min [1660000], rate=43626.81/min [1670000], rate=43660.13/min [1680000], rate=43712.06/min [1690000], rate=43782.38/min [1700000], rate=43870.97/min [1710000], rate=43940.04/min [1720000], rate=44008.53/min [1730000], rate=44076.43/min [1740000], rate=44162.44/min [1750000], rate=44247.79/min [1760000], rate=44351.11/min [1770000], rate=44416.56/min [1780000], rate=44518.55/min [1790000], rate=44601.33/min [1800000], rate=44609.67/min [1810000], rate=44728.17/min [1820000], rate=44754.10/min [1830000], rate=44834.63/min [1840000], rate=44914.56/min [1850000], rate=44957.47/min [1860000], rate=45072.70/min [1870000], rate=45132.74/min [1880000], rate=45228.55/min [1890000], rate=45360.00/min [1900000], rate=45436.43/min [1910000], rate=45512.31/min [1920000], rate=45569.62/min [1930000], rate=45626.48/min [1940000], rate=45718.77/min [1950000], rate=45828.44/min [1960000], rate=46009.39/min [1970000], rate=46081.87/min [1980000], rate=46225.68/min [1990000], rate=46297.01/min [2000000], rate=46367.85/min [2010000], rate=46456.09/min [2020000], rate=46561.66/min [2030000], rate=46613.09/min [2040000], rate=46717.56/min [2050000], rate=46750.29/min [2060000], rate=46853.68/min [2070000], rate=46938.78/min [2080000], rate=47041.09/min [2090000], rate=47178.33/min [2100000], rate=47297.30/min [2110000], rate=47415.73/min [2120000], rate=47569.18/min [2130000], rate=47668.78/min [2140000], rate=47767.86/min [2150000], rate=47884.19/min [2160000], rate=47982.23/min [2170000], rate=48026.56/min [2180000], rate=48070.56/min [2190000], rate=48149.51/min [2200000], rate=48245.61/min [2210000], rate=48376.50/min [2220000], rate=48471.62/min [2230000], rate=48566.24/min [2240000], rate=48660.39/min [2250000], rate=48754.06/min [2260000], rate=48776.98/min [2270000], rate=48817.20/min [2280000], rate=48857.14/min [2290000], rate=48879.40/min [2300000], rate=48970.90/min [2310000], rate=49096.71/min [2320000], rate=49204.67/min [2330000], rate=49260.04/min [2340000], rate=49349.74/min [2350000], rate=49421.66/min [2360000], rate=49458.61/min [2370000], rate=49495.30/min [2380000], rate=49600.56/min [2390000], rate=49722.61/min [2400000], rate=49809.75/min [2410000], rate=49862.07/min [2420000], rate=49879.77/min [2430000], rate=49880.26/min [2440000], rate=49914.76/min [2450000], rate=50000.00/min [2460000], rate=50084.83/min [2470000], rate=50169.26/min [2480000], rate=50253.29/min [2490000], rate=50370.87/min [2500000], rate=50403.23/min [2510000], rate=50469.17/min [2520000], rate=50484.14/min [2530000], rate=50549.45/min [2540000], rate=50614.41/min [2550000], rate=50628.72/min [2560000], rate=50609.56/min [2570000], rate=50640.39/min [2580000], rate=50687.62/min [2590000], rate=50767.72/min [2600000], rate=50814.33/min [2610000], rate=50877.19/min [2620000], rate=50906.74/min [2630000], rate=50968.99/min [2640000], rate=50998.07/min [2650000], rate=51076.13/min [2660000], rate=51104.71/min [2670000], rate=51165.76/min [2680000], rate=51210.19/min [2690000], rate=51270.65/min [2700000], rate=51363.35/min [2710000], rate=51471.98/min -building interval tree based on /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=50000.00/min [20000], rate=48000.00/min [30000], rate=38297.87/min [40000], rate=41379.31/min [50000], rate=44117.65/min [60000], rate=46753.25/min [70000], rate=49411.76/min [80000], rate=51063.83/min [90000], 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rate=29614.27/min [1200000], rate=29617.44/min [1210000], rate=29620.56/min [1220000], rate=29671.67/min [1230000], rate=29734.09/min [1240000], rate=29771.91/min [1250000], rate=29821.07/min [1260000], rate=29869.62/min [1270000], rate=29941.06/min [1280000], rate=30023.46/min [1290000], rate=30105.02/min [1300000], rate=30174.08/min [1310000], rate=30230.77/min [1320000], rate=30321.59/min [1330000], rate=30388.42/min [1340000], rate=30466.09/min [1350000], rate=30531.47/min [1360000], rate=30607.65/min [1370000], rate=30683.09/min [1380000], rate=30757.80/min [1390000], rate=30820.40/min [1400000], rate=30871.00/min [1410000], rate=30943.67/min [1420000], rate=31026.95/min [1430000], rate=31086.96/min [1440000], rate=31202.60/min [1450000], rate=31294.96/min [1460000], rate=31364.12/min [1470000], rate=31443.85/min [1480000], rate=31511.71/min [1490000], rate=31601.27/min [1500000], rate=31690.14/min [1510000], rate=31767.18/min [1520000], rate=31854.70/min [1530000], rate=31930.43/min [1540000], rate=32016.63/min [1550000], rate=32102.17/min [1560000], rate=32187.07/min [1570000], rate=32271.33/min [1580000], rate=32354.95/min [1590000], rate=32448.98/min [1600000], rate=32553.41/min [1610000], rate=32646.16/min [1620000], rate=32749.33/min [1630000], rate=32851.86/min [1640000], rate=32964.82/min [1650000], rate=33066.13/min [1660000], rate=33166.83/min [1670000], rate=33277.98/min [1680000], rate=33388.54/min [1690000], rate=33509.58/min [1700000], rate=33618.98/min [1710000], rate=33738.90/min [1720000], rate=33869.38/min [1730000], rate=34010.48/min [1740000], rate=34128.80/min [1750000], rate=34257.75/min [1760000], rate=34386.19/min [1770000], rate=34502.92/min [1780000], rate=34641.58/min [1790000], rate=34791.06/min [1800000], rate=34940.15/min [1810000], rate=35009.67/min [1820000], rate=35033.69/min [1830000], rate=35091.08/min [1840000], rate=35125.68/min [1850000], rate=35182.25/min [1860000], rate=35238.40/min [1870000], rate=35305.22/min [1880000], rate=35349.42/min [1890000], rate=35404.31/min [1900000], rate=35480.86/min [1910000], rate=35512.86/min [1920000], rate=35588.51/min [1930000], rate=35663.69/min [1940000], rate=35760.37/min [1950000], rate=35845.59/min [1960000], rate=35941.32/min [1970000], rate=36025.60/min [1980000], rate=36120.40/min [1990000], rate=36203.76/min [2000000], rate=36297.64/min [2010000], rate=36402.05/min [2020000], rate=36506.02/min [2030000], rate=36598.56/min [2040000], rate=36701.65/min [2050000], rate=36815.32/min [2060000], rate=36906.54/min [2070000], rate=37008.34/min [2080000], rate=37120.76/min [2090000], rate=37232.78/min [2100000], rate=37344.40/min [2110000], rate=37455.62/min [2120000], rate=37566.45/min [2130000], rate=37665.78/min [2140000], rate=37775.82/min [2150000], rate=37907.73/min [2160000], rate=38039.33/min [2170000], rate=38148.26/min [2180000], rate=38267.99/min [2190000], rate=38376.17/min [2200000], rate=38495.19/min [2210000], rate=38479.40/min [2220000], rate=38452.66/min [2230000], rate=38426.19/min [2240000], rate=38378.07/min [2250000], rate=38352.27/min [2260000], rate=38326.74/min [2270000], rate=38312.24/min [2280000], rate=38308.60/min [2290000], rate=38304.99/min [2300000], rate=38301.42/min [2310000], rate=38308.46/min [2320000], rate=38304.90/min [2330000], rate=38322.37/min [2340000], rate=38350.18/min [2350000], rate=38377.79/min [2360000], rate=38415.63/min [2370000], rate=38453.22/min [2380000], rate=38469.83/min [2390000], rate=38506.98/min [2400000], rate=38585.21/min [2410000], rate=38652.77/min [2420000], rate=38699.36/min [2430000], rate=38745.68/min [2440000], rate=38802.01/min [2450000], rate=38858.05/min [2460000], rate=38924.05/min [2470000], rate=39000.00/min [2480000], rate=39075.63/min [2490000], rate=39150.94/min [2500000], rate=39215.69/min [2510000], rate=39259.65/min [2520000], rate=39313.57/min [2530000], rate=39377.43/min [2540000], rate=39440.99/min [2550000], rate=39504.26/min [2560000], rate=39557.04/min [2570000], rate=39619.73/min [2580000], rate=39682.13/min [2590000], rate=39744.25/min [2600000], rate=39816.23/min [2610000], rate=39877.77/min [2620000], rate=39949.17/min [2630000], rate=40020.29/min [2640000], rate=40091.12/min [2650000], rate=40171.80/min [2660000], rate=40252.21/min [2670000], rate=40332.33/min [2680000], rate=40402.01/min [2690000], rate=40491.72/min [2700000], rate=40571.00/min [2710000], rate=40650.00/min [2720000], rate=40738.89/min [2730000], rate=40827.52/min [2740000], rate=40926.06/min [2750000], rate=41014.17/min [2760000], rate=41102.01/min [2770000], rate=41199.80/min [2780000], rate=41297.35/min [2790000], rate=41394.66/min [2800000], rate=41491.73/min [2810000], rate=41588.55/min [2820000], rate=41695.42/min [2830000], rate=41750.68/min [2840000], rate=41764.71/min [2850000], rate=41788.86/min [2860000], rate=41802.68/min [2870000], rate=41816.42/min [2880000], rate=41819.94/min [2890000], rate=41833.53/min [2900000], rate=41847.04/min [2910000], rate=41880.55/min [2920000], rate=41883.82/min [2930000], rate=41927.02/min [2940000], rate=41970.02/min [2950000], rate=41982.92/min [2960000], rate=42015.61/min [2970000], rate=42058.06/min [2980000], rate=42100.31/min [2990000], rate=42132.46/min [3000000], rate=42174.32/min [3010000], rate=42215.99/min [3020000], rate=42277.18/min [3030000], rate=42318.44/min [3040000], rate=42369.34/min [3050000], rate=42410.20/min [3060000], rate=42450.87/min [3070000], rate=42501.15/min [3080000], rate=42541.44/min [3090000], rate=42581.53/min [3100000], rate=42631.22/min [3110000], rate=42680.70/min [3120000], rate=42729.97/min [3130000], rate=42798.54/min [3140000], rate=42857.14/min [3150000], rate=42915.53/min [3160000], rate=42963.97/min [3170000], rate=43012.21/min [3180000], rate=43069.98/min [3190000], rate=43127.53/min [3200000], rate=43194.60/min [3210000], rate=43261.46/min [3220000], rate=43328.10/min [3230000], rate=43394.54/min [3240000], rate=43460.76/min [3250000], rate=43536.50/min [3260000], rate=43612.04/min [3270000], rate=43687.37/min [3280000], rate=43762.51/min [3290000], rate=43847.18/min [3300000], rate=43931.66/min [3310000], rate=44015.96/min [3320000], rate=44100.07/min [3330000], rate=44183.99/min [3340000], rate=44267.73/min [3350000], rate=44351.28/min [3360000], rate=44444.44/min [3370000], rate=44537.44/min [3380000], rate=44630.28/min [3390000], rate=44722.96/min [3400000], rate=44825.31/min [3410000], rate=44917.67/min [3420000], rate=45009.87/min [3430000], rate=45101.91/min [3440000], rate=45164.11/min [3450000], rate=45236.01/min [3460000], rate=45317.62/min [3470000], rate=45399.04/min [3480000], rate=45470.38/min [3490000], rate=45551.45/min [3500000], rate=45622.42/min [3510000], rate=45703.12/min [3520000], rate=45793.58/min [3530000], rate=45873.94/min [3540000], rate=45964.08/min [3550000], rate=46054.05/min [3560000], rate=46143.88/min [3570000], rate=46233.54/min [3580000], rate=46323.05/min [3590000], rate=46402.41/min [3600000], rate=46491.61/min [3610000], rate=46540.61/min [3620000], rate=46579.46/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir --filt_file /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 12000000.00 reads per min processed... 10500000.00 reads per min processed... 9600000.00 reads per min processed... 9000000.00 reads per min processed... 8571428.57 reads per min processed... 7333333.33 reads per min processed... 7200000.00 reads per min processed... 7090909.09 reads per min processed... 7000000.00 reads per min processed... 6923076.92 reads per min processed... 6857142.86 reads per min processed... 6800000.00 reads per min processed... 6352941.18 reads per min processed... 6333333.33 reads per min processed... 6315789.47 reads per min processed... 6300000.00 reads per min processed... 6285714.29 reads per min processed... 6272727.27 reads per min processed... 6260869.57 reads per min processed... 6250000.00 reads per min processed... 6240000.00 reads per min processed... 6230769.23 reads per min processed... 6222222.22 reads per min processed... 6214285.71 reads per min processed... 6206896.55 reads per min processed... 6200000.00 reads per min processed... 6193548.39 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5850000.00 reads per min processed... 5853658.54 reads per min processed... 5857142.86 reads per min processed... 5860465.12 reads per min processed... 5863636.36 reads per min processed... 5866666.67 reads per min processed... 5869565.22 reads per min processed... 5872340.43 reads per min processed... 5875000.00 reads per min processed... 5877551.02 reads per min processed... 5764705.88 reads per min processed... 5769230.77 reads per min processed... 5773584.91 reads per min processed... 5777777.78 reads per min processed... 5781818.18 reads per min processed... 5785714.29 reads per min processed... 5789473.68 reads per min processed... 5793103.45 reads per min processed... 5796610.17 reads per min processed... 5898305.08 reads per min processed... 5900000.00 reads per min processed... 5901639.34 reads per min processed... 5903225.81 reads per min processed... 5904761.90 reads per min processed... 5906250.00 reads per min processed... 5907692.31 reads per min processed... 5909090.91 reads per min processed... 5910447.76 reads per min processed... 5911764.71 reads per min processed... 5913043.48 reads per min processed... 5914285.71 reads per min processed... 5915492.96 reads per min processed... 5916666.67 reads per min processed... 5917808.22 reads per min processed... 5918918.92 reads per min processed... 5920000.00 reads per min processed... 5921052.63 reads per min processed... 5922077.92 reads per min processed... 5923076.92 reads per min processed... 5924050.63 reads per min processed... 5925000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6074074.07 reads per min processed... 6073170.73 reads per min processed... 6146341.46 reads per min processed... 6144578.31 reads per min processed... 6142857.14 reads per min processed... 6141176.47 reads per min processed... 6139534.88 reads per min processed... 6137931.03 reads per min processed... 6136363.64 reads per min processed... 6134831.46 reads per min processed... 6133333.33 reads per min processed... 6131868.13 reads per min processed... 6130434.78 reads per min processed... 6129032.26 reads per min processed... 6127659.57 reads per min processed... 6126315.79 reads per min processed... 6125000.00 reads per min processed... 6123711.34 reads per min processed... 6122448.98 reads per min processed... 6121212.12 reads per min processed... 6120000.00 reads per min processed... 6118811.88 reads per min processed... 6117647.06 reads per min processed... 6116504.85 reads per min processed... 6115384.62 reads per min processed... 6114285.71 reads per min processed... 6113207.55 reads per min processed... 6055555.56 reads per min processed... 6055045.87 reads per min processed... 6054545.45 reads per min processed... 6054054.05 reads per min processed... 6053571.43 reads per min processed... 6053097.35 reads per min processed... 6052631.58 reads per min processed... 6052173.91 reads per min processed... 6051724.14 reads per min processed... 6103448.28 reads per min processed... 6102564.10 reads per min processed... 6101694.92 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.gqDb8TiDdR/tih_rna_sample_00709_B23MVV7LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -553707.147967 EM: Round [1] log likelihood: -553235.385333 EM: Round [2] log likelihood: -553071.629477 EM: Round [3] log likelihood: -552997.249873 EM: Round [4] log likelihood: -552958.629991 EM: Round [5] log likelihood: -552936.926472 EM: Round [6] log likelihood: -552923.972303 EM: Round [7] log likelihood: -552915.817700 EM: Round [8] log likelihood: -552910.431243 EM: Round [9] log likelihood: -552906.718195 EM: Round [10] log likelihood: -552904.062305 EM: Round [11] log likelihood: -552902.101634 EM: Round [12] log likelihood: -552900.614827 EM: Round [13] log likelihood: -552899.461322 EM: Round [14] log likelihood: -552898.548761 EM: Round [15] log likelihood: -552897.814577 EM: Round [16] log likelihood: -552897.215219 EM: Round [17] log likelihood: -552896.719643 EM: Round [18] log likelihood: -552896.305252 EM: Round [19] log likelihood: -552895.955286 EM: Round [20] log likelihood: -552895.657110 EM: Round [21] log likelihood: -552895.401056 EM: Round [22] log likelihood: -552895.179624 EM: Round [23] log likelihood: -552894.986925 EM: Round [24] log likelihood: -552894.818281 EM: Round [25] log likelihood: -552894.669938 EM: Round [26] log likelihood: -552894.538852 EM: Round [27] log likelihood: -552894.422533 EM: Round [28] log likelihood: -552894.318928 EM: Round [29] log likelihood: -552894.226328 EM: Round [30] log likelihood: -552894.143302 EM: Round [31] log likelihood: -552894.068643 EM: Round [32] log likelihood: -552894.001327 EM: Round [33] log likelihood: -552893.940479 EM: Round [34] log likelihood: -552893.885349 EM: Round [35] log likelihood: -552893.835290 EM: Round [36] log likelihood: -552893.789741 EM: Round [37] log likelihood: -552893.748213 EM: Round [38] log likelihood: -552893.710282 EM: Round [39] log likelihood: -552893.675573 EM: Round [40] log likelihood: -552893.643759 EM: Round [41] log likelihood: -552893.614550 EM: Round [42] log likelihood: -552893.587690 EM: Round [43] log likelihood: -552893.562953 EM: Round [44] log likelihood: -552893.540135 EM: Round [45] log likelihood: -552893.519059 EM: Round [46] log likelihood: -552893.499563 EM: Round [47] log likelihood: -552893.481504 EM: Round [48] log likelihood: -552893.464753 EM: Round [49] log likelihood: -552893.449196 EM: Round [50] log likelihood: -552893.434729 EM: Round [51] log likelihood: -552893.421258 EM: Round [52] log likelihood: -552893.408699 EM: Round [53] log likelihood: -552893.396977 EM: Round [54] log likelihood: -552893.386022 EM: Round [55] log likelihood: -552893.375773 EM: Round [56] log likelihood: -552893.366173 EM: Round [57] log likelihood: -552893.357171 EM: Round [58] log likelihood: -552893.348721 EM: Round [59] log likelihood: -552893.340780 EM: Round [60] log likelihood: -552893.333309 EM: Round [61] log likelihood: -552893.326274 EM: Round [62] log likelihood: -552893.319643 EM: Round [63] log likelihood: -552893.313386 EM: Round [64] log likelihood: -552893.307477 EM: Round [65] log likelihood: -552893.301890 EM: Round [66] log likelihood: -552893.296605 EM: Round [67] log likelihood: -552893.291599 EM: Round [68] log likelihood: -552893.286854 EM: Round [69] log likelihood: -552893.282352 EM: Round [70] log likelihood: -552893.278079 EM: Round [71] log likelihood: -552893.274018 EM: Round [72] log likelihood: -552893.270156 EM: Round [73] log likelihood: -552893.266482 EM: Round [74] log likelihood: -552893.262982 EM: Round [75] log likelihood: -552893.259647 EM: Round [76] log likelihood: -552893.256466 EM: Round [77] log likelihood: -552893.253431 EM: Round [78] log likelihood: -552893.250533 EM: Round [79] log likelihood: -552893.247763 EM: Round [80] log likelihood: -552893.245116 EM: Round [81] log likelihood: -552893.242583 EM: Round [82] log likelihood: -552893.240158 EM: Round [83] log likelihood: -552893.237837 EM: Round [84] log likelihood: -552893.235612 EM: Round [85] log likelihood: -552893.233479 EM: Round [86] log likelihood: -552893.231433 EM: Round [87] log likelihood: -552893.229470 EM: Round [88] log likelihood: -552893.227586 EM: Round [89] log likelihood: -552893.225776 EM: Round [90] log likelihood: -552893.224037 EM: Round [91] log likelihood: -552893.222366 EM: Round [92] log likelihood: -552893.220758 EM: Round [93] log likelihood: -552893.219212 EM: Round [94] log likelihood: -552893.217724 EM: Round [95] log likelihood: -552893.216292 EM: Round [96] log likelihood: -552893.214912 EM: Round [97] log likelihood: -552893.213584 EM: Round [98] log likelihood: -552893.212304 EM: Round [99] log likelihood: -552893.211070 EM: Round [100] log likelihood: -552893.209880 EM: Round [101] log likelihood: -552893.208733 EM: Round [102] log likelihood: -552893.207626 EM: Round [103] log likelihood: -552893.206559 EM: Round [104] log likelihood: -552893.205528 EM: Round [105] log likelihood: -552893.204533 EM: Round [106] log likelihood: -552893.203573 EM: Round [107] log likelihood: -552893.202646 EM: Round [108] log likelihood: -552893.201750 EM: Round [109] log likelihood: -552893.200884 EM: Round [110] log likelihood: -552893.200048 EM: Round [111] log likelihood: -552893.199239 EM: Round [112] log likelihood: -552893.198458 EM: Round [113] log likelihood: -552893.197702 EM: Round [114] log likelihood: -552893.196971 EM: Round [115] log likelihood: -552893.196265 EM: Round [116] log likelihood: -552893.195581 EM: Round [117] log likelihood: -552893.194920 EM: Round [118] log likelihood: -552893.194280 EM: Round [119] log likelihood: -552893.193661 EM: Round [120] log likelihood: -552893.193062 EM: Round [121] log likelihood: -552893.192482 EM: Round [122] log likelihood: -552893.191921 EM: Round [123] log likelihood: -552893.191377 EM: Round [124] log likelihood: -552893.190851 EM: Round [125] log likelihood: -552893.190341 EM: Round [126] log likelihood: -552893.189848 EM: Round [127] log likelihood: -552893.189369 EM: Round [128] log likelihood: -552893.188906 EM: Round [129] log likelihood: -552893.188458 EM: Round [130] log likelihood: -552893.188023 EM: Round [131] log likelihood: -552893.187602 EM: Round [132] log likelihood: -552893.187193 EM: Round [133] log likelihood: -552893.186798 EM: Round [134] log likelihood: -552893.186414 EM: Round [135] log likelihood: -552893.186043 EM: Round [136] log likelihood: -552893.185682 EM: Round [137] log likelihood: -552893.185333 EM: Round [138] log likelihood: -552893.184994 EM: Round [139] log likelihood: -552893.184666 EM: Round [140] log likelihood: -552893.184348 EM: Round [141] log likelihood: -552893.184039 EM: Round [142] log likelihood: -552893.183740 EM: Round [143] log likelihood: -552893.183449 EM: Round [144] log likelihood: -552893.183167 EM: Round [145] log likelihood: -552893.182894 EM: Round [146] log likelihood: -552893.182629 EM: Round [147] log likelihood: -552893.182372 EM: Round [148] log likelihood: -552893.182123 EM: Round [149] log likelihood: -552893.181881 EM: Round [150] log likelihood: -552893.181646 EM: Round [151] log likelihood: -552893.181418 EM: Round [152] log likelihood: -552893.181197 EM: Round [153] log likelihood: -552893.180982 EM: Round [154] log likelihood: -552893.180774 EM: Round [155] log likelihood: -552893.180572 EM: Round [156] log likelihood: -552893.180375 EM: Round [157] log likelihood: -552893.180185 EM: Round [158] log likelihood: -552893.180000 EM: Round [159] log likelihood: -552893.179820 EM: Round [160] log likelihood: -552893.179646 EM: Round [161] log likelihood: -552893.179477 EM: Round [162] log likelihood: -552893.179313 EM: Round [163] log likelihood: -552893.179153 EM: Round [164] log likelihood: -552893.178998 EM: Round [165] log likelihood: -552893.178848 EM: Round [166] log likelihood: -552893.178701 EM: Round [167] log likelihood: -552893.178559 EM: Round [168] log likelihood: -552893.178422 EM: Round [169] log likelihood: -552893.178288 EM: Round [170] log likelihood: -552893.178158 EM: Round [171] log likelihood: -552893.178031 EM: Round [172] log likelihood: -552893.177908 EM: Round [173] log likelihood: -552893.177789 EM: Round [174] log likelihood: -552893.177673 EM: Round [175] log likelihood: -552893.177561 EM: Round [176] log likelihood: -552893.177451 EM: Round [177] log likelihood: -552893.177345 EM: Round [178] log likelihood: -552893.177242 EM: Round [179] log likelihood: -552893.177141 EM: Round [180] log likelihood: -552893.177044 EM: Stopping iterations at round 180 due to insufficient improvement in likelihood. EM: Starting log likelihood: -548272.721047 EM: Round [1] log likelihood: -547917.460432 EM: Round [2] log likelihood: -547796.744732 EM: Round [3] log likelihood: -547742.367254 EM: Round [4] log likelihood: -547714.346254 EM: Round [5] log likelihood: -547698.706239 EM: Round [6] log likelihood: -547689.427309 EM: Round [7] log likelihood: -547683.618738 EM: Round [8] log likelihood: -547679.801802 EM: Round [9] log likelihood: -547677.182829 EM: Round [10] log likelihood: -547675.316852 EM: Round [11] log likelihood: -547673.943782 EM: Round [12] log likelihood: -547672.905406 EM: Round [13] log likelihood: -547672.101800 EM: Round [14] log likelihood: -547671.467620 EM: Round [15] log likelihood: -547670.958767 EM: Round [16] log likelihood: -547670.544627 EM: Round [17] log likelihood: -547670.203408 EM: Round [18] log likelihood: -547669.919256 EM: Round [19] log likelihood: -547669.680408 EM: Round [20] log likelihood: -547669.477988 EM: Round [21] log likelihood: -547669.305192 EM: Round [22] log likelihood: -547669.156738 EM: Round [23] log likelihood: -547669.028467 EM: Round [24] log likelihood: -547668.917071 EM: Round [25] log likelihood: -547668.819892 EM: Round [26] log likelihood: -547668.734769 EM: Round [27] log likelihood: -547668.659934 EM: Round [28] log likelihood: -547668.593927 EM: Round [29] log likelihood: -547668.535533 EM: Round [30] log likelihood: -547668.483732 EM: Round [31] log likelihood: -547668.437667 EM: Round [32] log likelihood: -547668.396609 EM: Round [33] log likelihood: -547668.359937 EM: Round [34] log likelihood: -547668.327118 EM: Round [35] log likelihood: -547668.297696 EM: Round [36] log likelihood: -547668.271273 EM: Round [37] log likelihood: -547668.247506 EM: Round [38] log likelihood: -547668.226096 EM: Round [39] log likelihood: -547668.206783 EM: Round [40] log likelihood: -547668.189336 EM: Round [41] log likelihood: -547668.173556 EM: Round [42] log likelihood: -547668.159265 EM: Round [43] log likelihood: -547668.146309 EM: Round [44] log likelihood: -547668.134547 EM: Round [45] log likelihood: -547668.123860 EM: Round [46] log likelihood: -547668.114137 EM: Round [47] log likelihood: -547668.105283 EM: Round [48] log likelihood: -547668.097212 EM: Round [49] log likelihood: -547668.089847 EM: Round [50] log likelihood: -547668.083121 EM: Round [51] log likelihood: -547668.076971 EM: Round [52] log likelihood: -547668.071343 EM: Round [53] log likelihood: -547668.066189 EM: Round [54] log likelihood: -547668.061464 EM: Round [55] log likelihood: -547668.057128 EM: Round [56] log likelihood: -547668.053146 EM: Round [57] log likelihood: -547668.049486 EM: Round [58] log likelihood: -547668.046119 EM: Round [59] log likelihood: -547668.043019 EM: Round [60] log likelihood: -547668.040163 EM: Round [61] log likelihood: -547668.037529 EM: Round [62] log likelihood: -547668.035097 EM: Round [63] log likelihood: -547668.032851 EM: Round [64] log likelihood: -547668.030775 EM: Round [65] log likelihood: -547668.028854 EM: Round [66] log likelihood: -547668.027075 EM: Round [67] log likelihood: -547668.025427 EM: Round [68] log likelihood: -547668.023899 EM: Round [69] log likelihood: -547668.022480 EM: Round [70] log likelihood: -547668.021163 EM: Round [71] log likelihood: -547668.019938 EM: Round [72] log likelihood: -547668.018799 EM: Round [73] log likelihood: -547668.017739 EM: Round [74] log likelihood: -547668.016751 EM: Round [75] log likelihood: -547668.015830 EM: Round [76] log likelihood: -547668.014971 EM: Round [77] log likelihood: -547668.014169 EM: Round [78] log likelihood: -547668.013420 EM: Round [79] log likelihood: -547668.012719 EM: Round [80] log likelihood: -547668.012064 EM: Round [81] log likelihood: -547668.011450 EM: Round [82] log likelihood: -547668.010875 EM: Round [83] log likelihood: -547668.010335 EM: Round [84] log likelihood: -547668.009829 EM: Round [85] log likelihood: -547668.009354 EM: Round [86] log likelihood: -547668.008908 EM: Round [87] log likelihood: -547668.008488 EM: Round [88] log likelihood: -547668.008093 EM: Round [89] log likelihood: -547668.007721 EM: Round [90] log likelihood: -547668.007371 EM: Round [91] log likelihood: -547668.007040 EM: Round [92] log likelihood: -547668.006728 EM: Round [93] log likelihood: -547668.006434 EM: Round [94] log likelihood: -547668.006156 EM: Round [95] log likelihood: -547668.005893 EM: Round [96] log likelihood: -547668.005645 EM: Round [97] log likelihood: -547668.005409 EM: Round [98] log likelihood: -547668.005187 EM: Round [99] log likelihood: -547668.004975 EM: Round [100] log likelihood: -547668.004775 EM: Round [101] log likelihood: -547668.004585 EM: Round [102] log likelihood: -547668.004405 EM: Round [103] log likelihood: -547668.004233 EM: Round [104] log likelihood: -547668.004070 EM: Round [105] log likelihood: -547668.003915 EM: Round [106] log likelihood: -547668.003768 EM: Round [107] log likelihood: -547668.003627 EM: Round [108] log likelihood: -547668.003493 EM: Round [109] log likelihood: -547668.003366 EM: Round [110] log likelihood: -547668.003244 EM: Round [111] log likelihood: -547668.003128 EM: Round [112] log likelihood: -547668.003017 EM: Round [113] log likelihood: -547668.002911 EM: Round [114] log likelihood: -547668.002809 EM: Round [115] log likelihood: -547668.002712 EM: Stopping iterations at round 115 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 247632869 > /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir > /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir --annotate /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir -done, see /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1894, filtered: 13950) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.gqDb8TiDdR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.gqDb8TiDdR/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000278975.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000153363.13] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000253218.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000248376.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000263883.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000284671.1] WARNING, no entry stored in dbm for [ENSG00000226949.1] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000286387.1] WARNING, no entry stored in dbm for [ENSG00000260318.1] WARNING, no entry stored in dbm for [ENSG00000260254.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000278920.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000219463.1] WARNING, no entry stored in dbm for [ENSG00000263426.2] WARNING, no entry stored in dbm for [ENSG00000279467.1] WARNING, no entry stored in dbm for [ENSG00000080947.15] WARNING, no entry stored in dbm for [ENSG00000213104.3] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000253522.6] WARNING, no entry stored in dbm for [ENSG00000230645.2] WARNING, no entry stored in dbm for [ENSG00000232685.5] WARNING, no entry stored in dbm for [ENSG00000248568.1] WARNING, no entry stored in dbm for [ENSG00000235618.8] WARNING, no entry stored in dbm for [ENSG00000204623.9] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000224660.2] WARNING, no entry stored in dbm for [ENSG00000188511.12] WARNING, no entry stored in dbm for [ENSG00000284639.1] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000245498.7] WARNING, no entry stored in dbm for [ENSG00000274702.1] WARNING, no entry stored in dbm for [ENSG00000279157.1] WARNING, no entry stored in dbm for [ENSG00000233183.3] WARNING, no entry stored in dbm for [ENSG00000227220.1] WARNING, no entry stored in dbm for [ENSG00000236166.1] WARNING, no entry stored in dbm for [ENSG00000232599.1] WARNING, no 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WARNING, no entry stored in dbm for [ENSG00000233593.10] WARNING, no entry stored in dbm for [ENSG00000267454.6] WARNING, no entry stored in dbm for [ENSG00000287362.1] WARNING, no entry stored in dbm for [ENSG00000237232.9] WARNING, no entry stored in dbm for [ENSG00000286596.1] WARNING, no entry stored in dbm for [ENSG00000255959.1] WARNING, no entry stored in dbm for [ENSG00000249506.3] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000213062.5] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000198658.4] WARNING, no entry stored in dbm for [ENSG00000213033.4] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000185596.16] WARNING, no entry stored in dbm for [ENSG00000214820.3] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000223903.1] WARNING, no entry stored in dbm for [ENSG00000174930.4] WARNING, no entry stored in dbm for [ENSG00000205853.12] WARNING, no entry stored in dbm for [ENSG00000250274.2] WARNING, no entry stored in dbm for [ENSG00000230551.4] WARNING, no entry stored in dbm for [ENSG00000260737.6] WARNING, no entry stored in dbm for [ENSG00000239470.3] WARNING, no entry stored in dbm for [ENSG00000249348.1] WARNING, no entry stored in dbm for [ENSG00000248049.7] WARNING, no entry stored in dbm for [ENSG00000250568.1] WARNING, no entry stored in dbm for [ENSG00000197320.5] WARNING, no entry stored in dbm for [ENSG00000258038.6] WARNING, no entry stored in dbm for [ENSG00000236810.6] WARNING, no entry stored in dbm for [ENSG00000205231.1] WARNING, no entry stored in dbm for [ENSG00000258384.1] WARNING, no entry stored in dbm for [ENSG00000236130.2] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000186825.6] WARNING, no entry stored in dbm for [ENSG00000267675.1] WARNING, no entry stored in dbm for [ENSG00000234782.3] WARNING, no entry stored in dbm for [ENSG00000256022.6] WARNING, no entry stored in dbm for [ENSG00000256022.6] WARNING, no entry stored in dbm for [ENSG00000256022.6] WARNING, no entry stored in dbm for [ENSG00000256022.6] WARNING, no entry stored in dbm for [ENSG00000256022.6] WARNING, no entry stored in dbm for [ENSG00000176840.12] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000228791.8] WARNING, no entry stored in dbm for [ENSG00000254851.1] WARNING, no entry stored in dbm for [ENSG00000239636.1] WARNING, no entry stored in dbm for [ENSG00000243319.7] WARNING, no entry stored in dbm for [ENSG00000267280.5] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000258350.1] WARNING, no entry stored in dbm for [ENSG00000226648.2] WARNING, no entry stored in dbm for [ENSG00000235238.1] WARNING, no entry stored in dbm for [ENSG00000258493.2] WARNING, no entry stored in dbm for [ENSG00000247950.7] WARNING, no entry stored in dbm for [ENSG00000234106.3] WARNING, no entry stored in dbm for [ENSG00000234106.3] WARNING, no entry stored in dbm for [ENSG00000279142.1] WARNING, no entry stored in dbm for [ENSG00000234898.1] WARNING, no entry stored in dbm for [ENSG00000283944.1] WARNING, no entry stored in dbm for [ENSG00000267659.5] WARNING, no entry stored in dbm for [ENSG00000201785.1] WARNING, no entry stored in dbm for [ENSG00000201302.1] WARNING, no entry stored in dbm for [ENSG00000207008.1] WARNING, no entry stored in dbm for [ENSG00000269893.8] WARNING, no entry stored in dbm for [ENSG00000268364.2] WARNING, no entry stored in dbm for [ENSG00000258232.2] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000200795.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000234771.3] WARNING, no entry stored in dbm for [ENSG00000241361.8] WARNING, no entry stored in dbm for [ENSG00000241361.8] WARNING, no entry stored in dbm for [ENSG00000235110.5] WARNING, no entry stored in dbm for [ENSG00000275110.1] WARNING, no entry stored in dbm for [ENSG00000247950.7] WARNING, no entry stored in dbm for [ENSG00000248965.1] WARNING, no entry stored in dbm for [ENSG00000228956.8] WARNING, no entry stored in dbm for [ENSG00000272870.3] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000218048.2] WARNING, no entry stored in dbm for [ENSG00000230777.1] WARNING, no entry stored in dbm for [ENSG00000225224.1] WARNING, no entry stored in dbm for [ENSG00000233416.1] WARNING, no entry stored in dbm for [ENSG00000287882.1] WARNING, no entry stored in dbm for [ENSG00000240356.6] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000215030.5] WARNING, no entry stored in dbm for [ENSG00000234498.3] WARNING, no entry stored in dbm for [ENSG00000234608.8] WARNING, no entry stored in dbm for [ENSG00000238386.1] WARNING, no entry stored in dbm for [ENSG00000230091.6] WARNING, no entry stored in dbm for [ENSG00000240606.3] WARNING, no entry stored in dbm for [ENSG00000239808.3] WARNING, no entry stored in dbm for [ENSG00000199990.1] WARNING, no entry stored in dbm for [ENSG00000254040.2] WARNING, no entry stored in dbm for [ENSG00000235904.3] WARNING, no entry stored in dbm for [ENSG00000236741.4] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000237984.3] WARNING, no entry stored in dbm for [ENSG00000225125.2] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000232098.3] WARNING, no entry stored in dbm for [ENSG00000255216.2] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000231503.4] WARNING, no entry stored in dbm for [ENSG00000242009.2] WARNING, no entry stored in dbm for [ENSG00000281128.2] WARNING, no entry stored in dbm for [ENSG00000231165.3] WARNING, no entry stored in dbm for [ENSG00000199683.1] WARNING, no entry stored in dbm for [ENSG00000271394.1] WARNING, no entry stored in dbm for [ENSG00000284543.1] WARNING, no entry stored in dbm for [ENSG00000248927.1] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000250842.1] WARNING, no entry stored in dbm for [ENSG00000203739.4] WARNING, no entry stored in dbm for [ENSG00000234801.3] WARNING, no entry stored in dbm for [ENSG00000259948.2] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000235316.1] WARNING, no entry stored in dbm for [ENSG00000231205.11] WARNING, no entry stored in dbm for [ENSG00000274461.2] WARNING, no entry stored in dbm for [ENSG00000214176.9] WARNING, no entry stored in dbm for [ENSG00000223599.1] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000273804.1] WARNING, no entry stored in dbm for [ENSG00000229626.1] WARNING, no entry stored in dbm for [ENSG00000213713.3] WARNING, no entry stored in dbm for [ENSG00000183506.17] WARNING, no entry stored in dbm for [ENSG00000282728.1] WARNING, no entry stored in dbm for [ENSG00000237433.1] WARNING, no entry stored in dbm for [ENSG00000251598.2] WARNING, no entry stored in dbm for [ENSG00000234232.7] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000224729.6] WARNING, no entry stored in dbm for [ENSG00000227418.6] WARNING, no entry stored in dbm for [ENSG00000179818.14] WARNING, no entry stored in dbm for [ENSG00000278090.3] WARNING, no entry stored in dbm for [ENSG00000257894.2] WARNING, no entry stored in dbm for [ENSG00000267270.6] WARNING, no entry stored in dbm for [ENSG00000237626.2] WARNING, no entry stored in dbm for [ENSG00000255642.1] WARNING, no entry stored in dbm for [ENSG00000244479.7] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000229127.2] WARNING, no entry stored in dbm for [ENSG00000223705.9] WARNING, no entry stored in dbm for [ENSG00000223705.9] WARNING, no entry stored in dbm for [ENSG00000236409.2] WARNING, no entry stored in dbm for [ENSG00000232491.1] WARNING, no entry stored in dbm for [ENSG00000236859.7] WARNING, no entry stored in dbm for [ENSG00000285100.1] WARNING, no entry stored in dbm for [ENSG00000223489.1] WARNING, no entry stored in dbm for [ENSG00000206337.12] WARNING, no entry stored in dbm for [ENSG00000249278.1] WARNING, no entry stored in dbm for [ENSG00000268061.5] WARNING, no entry stored in dbm for [ENSG00000176593.8] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000237187.9] WARNING, no entry stored in dbm for [ENSG00000227001.3] WARNING, no entry stored in dbm for [ENSG00000227001.3] WARNING, no entry stored in dbm for [ENSG00000249119.1] WARNING, no entry stored in dbm for [ENSG00000283879.1] WARNING, no entry stored in dbm for [ENSG00000288107.1] WARNING, no entry stored in dbm for [ENSG00000254241.1] WARNING, no entry stored in dbm for [ENSG00000275734.2] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000239827.8] WARNING, no entry stored in dbm for [ENSG00000172250.16] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000233154.6] WARNING, no entry stored in dbm for [ENSG00000248309.7] WARNING, no entry stored in dbm for [ENSG00000248464.1] WARNING, no entry stored in dbm for [ENSG00000179611.3] WARNING, no entry stored in dbm for [ENSG00000234456.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000254968.7] WARNING, no entry stored in dbm for [ENSG00000283196.2] WARNING, no entry stored in dbm for [ENSG00000253868.4] WARNING, no entry stored in dbm for [ENSG00000262903.1] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000231367.6] WARNING, no entry stored in dbm for [ENSG00000251129.2] WARNING, no entry stored in dbm for [ENSG00000257523.3] WARNING, no entry stored in dbm for [ENSG00000261241.7] WARNING, no entry stored in dbm for [ENSG00000248132.3] WARNING, no entry stored in dbm for [ENSG00000253490.5] WARNING, no entry stored in dbm for [ENSG00000248489.2] WARNING, no entry stored in dbm for [ENSG00000239454.1] WARNING, no entry stored in dbm for [ENSG00000243572.1] WARNING, no entry stored in dbm for [ENSG00000260840.2] WARNING, no entry stored in dbm for [ENSG00000234279.2] WARNING, no entry stored in dbm for [ENSG00000226125.2] WARNING, no entry stored in dbm for [ENSG00000233421.4] WARNING, no entry stored in dbm for [ENSG00000237292.1] WARNING, no entry stored in dbm for [ENSG00000236532.6] WARNING, no entry stored in dbm for [ENSG00000258754.8] WARNING, no entry stored in dbm for [ENSG00000232624.8] WARNING, no entry stored in dbm for [ENSG00000236078.2] WARNING, no entry stored in dbm for [ENSG00000230176.3] WARNING, no entry stored in dbm for [ENSG00000274827.4] WARNING, no entry stored in dbm for [ENSG00000233806.7] WARNING, no entry stored in dbm for [ENSG00000233806.7] WARNING, no entry stored in dbm for [ENSG00000281404.2] WARNING, no entry stored in dbm for [ENSG00000258867.6] WARNING, no entry stored in dbm for [ENSG00000272419.6] WARNING, no entry stored in dbm for [ENSG00000267272.5] WARNING, no entry stored in dbm for [ENSG00000224577.3] WARNING, no entry stored in dbm for [ENSG00000228393.4] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000224316.1] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000189238.6] WARNING, no entry stored in dbm for [ENSG00000205634.7] WARNING, no entry stored in dbm for [ENSG00000233093.6] WARNING, no entry stored in dbm for [ENSG00000214145.7] WARNING, no entry stored in dbm for [ENSG00000266256.3] WARNING, no entry stored in dbm for [ENSG00000226995.9] WARNING, no entry stored in dbm for [ENSG00000248397.1] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000225077.3] WARNING, no entry stored in dbm for [ENSG00000225077.3] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000258279.4] WARNING, no entry stored in dbm for [ENSG00000170858.10] WARNING, no entry stored in dbm for [ENSG00000230979.3] WARNING, no entry stored in dbm for [ENSG00000177369.9] WARNING, no entry stored in dbm for [ENSG00000229320.3] WARNING, no entry stored in dbm for [ENSG00000258948.2] WARNING, no entry stored in dbm for [ENSG00000257495.5] WARNING, no entry stored in dbm for [ENSG00000227398.4] WARNING, no entry stored in dbm for [ENSG00000222386.1] WARNING, no entry stored in dbm for [ENSG00000236567.2] WARNING, no entry stored in dbm for [ENSG00000231871.5] WARNING, no entry stored in dbm for [ENSG00000267532.5] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000202515.1] WARNING, no entry stored in dbm for [ENSG00000232888.4] WARNING, no entry stored in dbm for [ENSG00000235864.1] WARNING, no entry stored in dbm for [ENSG00000282100.1] WARNING, no entry stored in dbm for [ENSG00000239921.6] WARNING, no entry stored in dbm for [ENSG00000243188.1] WARNING, no entry stored in dbm for [ENSG00000237285.1] WARNING, no entry stored in dbm for [ENSG00000231470.1] WARNING, no entry stored in dbm for [ENSG00000203489.3] WARNING, no entry stored in dbm for [ENSG00000233440.2] WARNING, no entry stored in dbm for [ENSG00000230795.3] WARNING, no entry stored in dbm for [ENSG00000204397.9] WARNING, no entry stored in dbm for [ENSG00000254823.2] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000287750.1] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000242808.10] WARNING, no entry stored in dbm for [ENSG00000267065.2] WARNING, no entry stored in dbm for [ENSG00000100058.12] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000239906.1] WARNING, no entry stored in dbm for [ENSG00000229964.1] WARNING, no entry stored in dbm for [ENSG00000244952.2] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000250959.2] WARNING, no entry stored in dbm for [ENSG00000234648.1] WARNING, no entry stored in dbm for [ENSG00000258744.2] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000239516.1] WARNING, no entry stored in dbm for [ENSG00000088340.17] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000227372.12] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000248019.3] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000224032.7] WARNING, no entry stored in dbm for [ENSG00000226688.7] WARNING, no entry stored in dbm for [ENSG00000286699.1] WARNING, no entry stored in dbm for [ENSG00000232445.2] WARNING, no entry stored in dbm for [ENSG00000199672.1] WARNING, no entry stored in dbm for [ENSG00000184991.3] WARNING, no entry stored in dbm for [ENSG00000137970.7] WARNING, no entry stored in dbm for [ENSG00000267336.1] WARNING, no entry stored in dbm for [ENSG00000272145.1] WARNING, no entry stored in dbm for [ENSG00000176593.8] WARNING, no entry stored in dbm for [ENSG00000286552.1] WARNING, no entry stored in dbm for [ENSG00000260447.1] WARNING, no entry stored in dbm for [ENSG00000268120.1] WARNING, no entry stored in dbm for [ENSG00000215386.13] WARNING, no entry stored in dbm for [ENSG00000176584.18] WARNING, no entry stored in dbm for [ENSG00000271380.1] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000261241.7] WARNING, no entry stored in dbm for [ENSG00000201161.1] WARNING, no entry stored in dbm for [ENSG00000280927.1] WARNING, no entry stored in dbm for [ENSG00000229732.1] WARNING, no entry stored in dbm for [ENSG00000100058.12] WARNING, no entry stored in dbm for [ENSG00000080947.15] WARNING, no entry stored in dbm for [ENSG00000250391.1] WARNING, no entry stored in dbm for [ENSG00000242908.6] WARNING, no entry stored in dbm for [ENSG00000264063.1] WARNING, no entry stored in dbm for [ENSG00000270533.2] WARNING, no entry stored in dbm for [ENSG00000260318.1] WARNING, no entry stored in dbm for [ENSG00000175728.4] WARNING, no entry stored in dbm for [ENSG00000287774.1] WARNING, no entry stored in dbm for [ENSG00000247572.8] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000223960.7] WARNING, no entry stored in dbm for [ENSG00000272888.7] WARNING, no entry stored in dbm for [ENSG00000237986.4] WARNING, no entry stored in dbm for [ENSG00000273619.1] WARNING, no entry stored in dbm for [ENSG00000229140.11] WARNING, no entry stored in dbm for [ENSG00000228544.1] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000286207.1] WARNING, no entry stored in dbm for [ENSG00000205086.8] WARNING, no entry stored in dbm for [ENSG00000205885.7] WARNING, no entry stored in dbm for [ENSG00000274499.1] WARNING, no entry stored in dbm for [ENSG00000244716.3] WARNING, no entry stored in dbm for [ENSG00000234996.4] WARNING, no entry stored in dbm for [ENSG00000203414.2] WARNING, no entry stored in dbm for [ENSG00000256576.2] WARNING, no entry stored in dbm for [ENSG00000234235.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000237949.2] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000231703.2] WARNING, no entry stored in dbm for [ENSG00000222826.1] WARNING, no entry stored in dbm for [ENSG00000250922.1] WARNING, no entry stored in dbm for [ENSG00000205464.13] WARNING, no entry stored in dbm for [ENSG00000281398.4] WARNING, no entry stored in dbm for [ENSG00000262500.1] WARNING, no entry stored in dbm for [ENSG00000235919.4] WARNING, no entry stored in dbm for [ENSG00000234777.3] WARNING, no entry stored in dbm for [ENSG00000285623.1] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000254984.1] WARNING, no entry stored in dbm for [ENSG00000253885.1] WARNING, no entry stored in dbm for [ENSG00000254363.6] WARNING, no entry stored in dbm for [ENSG00000254434.1] WARNING, no entry stored in dbm for [ENSG00000284639.1] WARNING, no entry stored in dbm for [ENSG00000285933.1] WARNING, no entry stored in dbm for [ENSG00000254568.1] WARNING, no entry stored in dbm for [ENSG00000272249.1] WARNING, no entry stored in dbm for [ENSG00000246090.7] WARNING, no entry stored in dbm for [ENSG00000254631.5] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000273284.1] WARNING, no entry stored in dbm for [ENSG00000264449.6] WARNING, no entry stored in dbm for [ENSG00000254705.1] WARNING, no entry stored in dbm for [ENSG00000219529.2] WARNING, no entry stored in dbm for [ENSG00000239393.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000259516.2] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000179406.8] WARNING, no entry stored in dbm for [ENSG00000259984.1] WARNING, no entry stored in dbm for [ENSG00000234712.1] WARNING, no entry stored in dbm for [ENSG00000227766.1] WARNING, no entry stored in dbm for [ENSG00000238287.1] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000234042.1] WARNING, no entry stored in dbm for [ENSG00000256029.6] WARNING, no entry stored in dbm for [ENSG00000235440.1] WARNING, no entry stored in dbm for [ENSG00000226197.3] WARNING, no entry stored in dbm for [ENSG00000223583.1] WARNING, no entry stored in dbm for [ENSG00000225891.2] WARNING, no entry stored in dbm for [ENSG00000226643.2] WARNING, no entry stored in dbm for [ENSG00000232679.2] WARNING, no entry stored in dbm for [ENSG00000286469.1] WARNING, no entry stored in dbm for [ENSG00000287887.1] WARNING, no entry stored in dbm for [ENSG00000279459.1] WARNING, no entry stored in dbm for [ENSG00000286865.1] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000273036.3] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000258957.2] WARNING, no entry stored in dbm for [ENSG00000225032.5] WARNING, no entry stored in dbm for [ENSG00000245025.3] WARNING, no entry stored in dbm for [ENSG00000234648.1] WARNING, no entry stored in dbm for [ENSG00000232573.1] WARNING, no entry stored in dbm for [ENSG00000242995.1] WARNING, no entry stored in dbm for [ENSG00000259444.1] WARNING, no entry stored in dbm for [ENSG00000247925.2] WARNING, no entry stored in dbm for [ENSG00000272078.1] WARNING, no entry stored in dbm for [ENSG00000228436.3] WARNING, no entry stored in dbm for [ENSG00000233183.3] WARNING, no entry stored in dbm for [ENSG00000284914.1] WARNING, no entry stored in dbm for [ENSG00000230387.4] WARNING, no entry stored in dbm for [ENSG00000225785.1] WARNING, no entry stored in dbm for [ENSG00000287100.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000274760.1] WARNING, no entry stored in dbm for [ENSG00000205653.2] WARNING, no entry stored in dbm for [ENSG00000271419.1] WARNING, no entry stored in dbm for [ENSG00000232848.1] WARNING, no entry stored in dbm for [ENSG00000213312.3] WARNING, no entry stored in dbm for [ENSG00000272476.1] WARNING, no entry stored in dbm for [ENSG00000279110.1] WARNING, no entry stored in dbm for [ENSG00000279738.1] WARNING, no entry stored in dbm for [ENSG00000230149.2] WARNING, no entry stored in dbm for [ENSG00000262265.2] WARNING, no entry stored in dbm for [ENSG00000229425.3] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000254332.1] WARNING, no entry stored in dbm for [ENSG00000203876.10] WARNING, no entry stored in dbm for [ENSG00000258730.1] WARNING, no entry stored in dbm for [ENSG00000286676.1] WARNING, no entry stored in dbm for [ENSG00000215861.6] WARNING, no entry stored in dbm for [ENSG00000226067.7] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000277406.2] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000254539.1] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000275976.5] WARNING, no entry stored in dbm for [ENSG00000286275.1] WARNING, no entry stored in dbm for [ENSG00000287342.1] WARNING, no entry stored in dbm for [ENSG00000263585.1] WARNING, no entry stored in dbm for [ENSG00000283235.2] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000250999.2] WARNING, no entry stored in dbm for [ENSG00000261327.5] WARNING, no entry stored in dbm for [ENSG00000214999.3] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000279474.1] WARNING, no entry stored in dbm for [ENSG00000257512.1] WARNING, no entry stored in dbm for [ENSG00000259704.2] WARNING, no entry stored in dbm for [ENSG00000244398.1] WARNING, no entry stored in dbm for [ENSG00000242123.1] WARNING, no entry stored in dbm for [ENSG00000236722.1] WARNING, no entry stored in dbm for [ENSG00000248240.1] WARNING, no entry stored in dbm for [ENSG00000258938.1] WARNING, no entry stored in dbm for [ENSG00000248240.1] WARNING, no entry stored in dbm for [ENSG00000232098.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000288075.1] WARNING, no entry stored in dbm for [ENSG00000180764.13] WARNING, no entry stored in dbm for [ENSG00000248468.2] WARNING, no entry stored in dbm for [ENSG00000251548.1] WARNING, no entry stored in dbm for [ENSG00000227496.3] WARNING, no entry stored in dbm for [ENSG00000285728.2] WARNING, no entry stored in dbm for [ENSG00000233387.1] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000259848.9] WARNING, no entry stored in dbm for [ENSG00000269937.1] WARNING, no entry stored in dbm for [ENSG00000256625.1] WARNING, no entry stored in dbm for [ENSG00000228629.2] WARNING, no entry stored in dbm for [ENSG00000279205.1] WARNING, no entry stored in dbm for [ENSG00000260417.1] WARNING, no entry stored in dbm for [ENSG00000262136.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000255410.2] WARNING, no entry stored in dbm for [ENSG00000237850.7] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000259402.1] WARNING, no entry stored in dbm for [ENSG00000234805.1] WARNING, no entry stored in dbm for [ENSG00000270112.4] WARNING, no entry stored in dbm for [ENSG00000259380.6] WARNING, no entry stored in dbm for [ENSG00000250007.7] WARNING, no entry stored in dbm for [ENSG00000260349.1] WARNING, no entry stored in dbm for [ENSG00000257225.1] WARNING, no entry stored in dbm for [ENSG00000254680.1] WARNING, no entry stored in dbm for [ENSG00000249258.2] WARNING, no entry stored in dbm for [ENSG00000249258.2] WARNING, no entry stored in dbm for [ENSG00000242299.1] WARNING, no entry stored in dbm for [ENSG00000214650.3] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000225187.1] WARNING, no entry stored in dbm for [ENSG00000286180.1] WARNING, no entry stored in dbm for [ENSG00000231359.3] WARNING, no entry stored in dbm for [ENSG00000213942.3] WARNING, no entry stored in dbm for [ENSG00000287388.1] WARNING, no entry stored in dbm for [ENSG00000256278.1] WARNING, no entry stored in dbm for [ENSG00000260894.1] WARNING, no entry stored in dbm for [ENSG00000137808.12] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000214980.4] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000261481.1] WARNING, no entry stored in dbm for [ENSG00000272267.2] WARNING, no entry stored in dbm for [ENSG00000230551.4] WARNING, no entry stored in dbm for [ENSG00000240418.1] WARNING, no entry stored in dbm for [ENSG00000268518.1] WARNING, no entry stored in dbm for [ENSG00000244705.1] WARNING, no entry stored in dbm for [ENSG00000285577.1] WARNING, no entry stored in dbm for [ENSG00000231409.3] WARNING, no entry stored in dbm for [ENSG00000242087.2] WARNING, no entry stored in dbm for [ENSG00000241679.2] WARNING, no entry stored in dbm for [ENSG00000244493.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000266290.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000262712.1] WARNING, no entry stored in dbm for [ENSG00000226994.9] WARNING, no entry stored in dbm for [ENSG00000228835.1] WARNING, no entry stored in dbm for [ENSG00000271499.1] WARNING, no entry stored in dbm for [ENSG00000247324.2] WARNING, no entry stored in dbm for [ENSG00000283695.1] WARNING, no entry stored in dbm for [ENSG00000240376.1] WARNING, no entry stored in dbm for [ENSG00000286608.1] WARNING, no entry stored in dbm for [ENSG00000253133.2] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000257612.2] WARNING, no entry stored in dbm for [ENSG00000257176.3] WARNING, no entry stored in dbm for [ENSG00000229689.3] WARNING, no entry stored in dbm for [ENSG00000279198.1] WARNING, no entry stored in dbm for [ENSG00000254170.1] WARNING, no entry stored in dbm for [ENSG00000237875.1] WARNING, no entry stored in dbm for [ENSG00000253955.2] WARNING, no entry stored in dbm for [ENSG00000288072.1] WARNING, no entry stored in dbm for [ENSG00000224194.1] WARNING, no entry stored in dbm for [ENSG00000224194.1] WARNING, no entry stored in dbm for [ENSG00000234718.7] WARNING, no entry stored in dbm for [ENSG00000244413.1] WARNING, no entry stored in dbm for [ENSG00000286460.1] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000275665.1] WARNING, no entry stored in dbm for [ENSG00000236213.2] WARNING, no entry stored in dbm for [ENSG00000269745.1] WARNING, no entry stored in dbm for [ENSG00000270114.1] WARNING, no entry stored in dbm for [ENSG00000264067.1] WARNING, no entry stored in dbm for [ENSG00000214970.8] WARNING, no entry stored in dbm for [ENSG00000271500.1] WARNING, no entry stored in dbm for [ENSG00000224273.2] WARNING, no entry stored in dbm for [ENSG00000286366.1] WARNING, no entry stored in dbm for [ENSG00000279601.1] WARNING, no entry stored in dbm for [ENSG00000286218.2] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000284605.1] WARNING, no entry stored in dbm for [ENSG00000228204.2] WARNING, no entry stored in dbm for [ENSG00000267304.1] WARNING, no entry stored in dbm for [ENSG00000274367.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000228113.7] WARNING, no entry stored in dbm for [ENSG00000227249.1] WARNING, no entry stored in dbm for [ENSG00000232956.9] WARNING, no entry stored in dbm for [ENSG00000231749.3] WARNING, no entry stored in dbm for [ENSG00000251595.7] * STAR-Fusion complete. See output: /tmp/nxf.gqDb8TiDdR/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)