Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/a247ae65e4642e564c0e82cba87afa/tih_rna_sample_00737_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/32/c3a9eb5a4244e3983c7c8293dca33a/tih_rna_sample_00737_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/e0c4d4a597bcdec55b2de3cdd173e0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/e0c4d4a597bcdec55b2de3cdd173e0/.command.run
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory