File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/167f6a2957df2b36f0e56a1d06cb1f/.command.err
Size
561 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (FFPE_V4_0002_RNA_0001_B23MVV7LT4_1)
Attempt

Content

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Processing Kallisto file: FFPE_V4_0002_RNA_0001_B23MVV7LT4_1/abundance.h5
Successfully converted FFPE_V4_0002_RNA_0001_B23MVV7LT4_1/abundance.h5 to FFPE_V4_0002_RNA_0001_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: FFPE_V4_0002_RNA_0001_B23MVV7LT4_1
  Mean Fragment Length: 170.7 bp
  Median Fragment Length: 155.0 bp
  pct_mito_est_counts: 0.006%
  pct_ribo_est_counts: 1.81%
  pct_hk_est_counts: 1.028%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.012%
  pct_ribo_tpm: 5.061%
  pct_hk_tpm: 1.441%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.718%