AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 242
Pass (FILTER=PASS): 35 (14.5%)
Fail (FILTER=FAIL): 207 (85.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 86
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 26
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high): 14
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);aih_curated_blacklist: 2
aih_curated_blacklist: 1
total_reads_below_min(4.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 1
Breakdown by confidence:
high: 35 pass, 2 fail (total: 37)
low: 0 pass, 93 fail (total: 93)
medium: 0 pass, 112 fail (total: 112)
Arriba filter: 242 rows -> 35 PASS; wrote tih_rna_sample_00628_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00628_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00628_B23MVV7LT4_1.arriba.fusions.filter_summary.txt