Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/e88fd7fc7045f143707b3a331bf8bc/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/46ce893438bc5e015e6219fbc725b1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/46ce893438bc5e015e6219fbc725b1/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/1d979abaed073c06b5748fbff6148d/tih_rna_sample_00570_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/55c6f603edda9326c80d16dcf29b08/tih_rna_sample_00570_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 365013282
[W::hts_idx_load3] The index file is older than the data file: tih_rna_sample_00570_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	365013282
Known Splicing Events:	361877404
Partial Novel Splicing Events:	1456224
Novel Splicing Events:	1514623
Filtered Splicing Events:	165031

Total splicing  Junctions:	662023
Known Splicing Junctions:	269074
Partial Novel Splicing Junctions:	161846
Novel Splicing Junctions:	231103

===================================================================
Create BED file ...
Create Interact file ...