Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-7324c8a8-f474-426a-a5c9-715912777f94/c4/140ab148cdcf1ed9bdffe91f534e47/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/d0986210cc9e375983c62eea0e914b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/e9faaecccf564a4c424ddfe1aa23b9/tih_rna_sample_00583_B23MVV7LT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/d0986210cc9e375983c62eea0e914b/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/93fbe5220a6f23397ad3ec29f6ad5d/tih_rna_sample_00583_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
GRHL2--NCALD
starfusion
arriba
AL669831.1--SEPTIN14
starfusion
arriba
SNX16--TRPS1
starfusion
TLK2P1--AC110079.1
starfusion
TLK2--AC240565.1
starfusion
ZNF703--MTSS1
starfusion
TVP23C--CDRT4
arriba
STX16--NPEPL1
arriba
SSH2--AC022816.1
arriba
SSH2--RPS18P12
arriba
PCDHA3--PCDHAC1
arriba
PCDHA3--PCDHAC2
arriba
PCDHA3--PCDHA13
arriba
CASK--RRBP1
arriba
CASK--BANF2
arriba

  0%|          | 0/15 [00:00<?, ?it/s]
Processing GRHL2--NCALD:   0%|          | 0/15 [00:00<?, ?it/s]
Processing GRHL2--NCALD:   7%|▋         | 1/15 [00:00<00:01,  9.08it/s]
Processing AL669831.1--SEPTIN14:   7%|▋         | 1/15 [00:00<00:01,  9.08it/s]
Processing AL669831.1--SEPTIN14:  13%|█▎        | 2/15 [00:00<00:01,  9.36it/s]
Processing SNX16--TRPS1:  13%|█▎        | 2/15 [00:00<00:01,  9.36it/s]        
Processing SNX16--TRPS1:  20%|██        | 3/15 [00:00<00:01,  9.47it/s]
Processing TLK2P1--AC110079.1:  20%|██        | 3/15 [00:00<00:01,  9.47it/s]
Processing TLK2P1--AC110079.1:  27%|██▋       | 4/15 [00:00<00:01,  9.51it/s]
Processing TLK2--AC240565.1:  27%|██▋       | 4/15 [00:00<00:01,  9.51it/s]  
Processing TLK2--AC240565.1:  33%|███▎      | 5/15 [00:00<00:01,  9.54it/s]
Processing ZNF703--MTSS1:  33%|███▎      | 5/15 [00:00<00:01,  9.54it/s]   
Processing ZNF703--MTSS1:  40%|████      | 6/15 [00:00<00:00,  9.56it/s]
Processing TVP23C--CDRT4:  40%|████      | 6/15 [00:00<00:00,  9.56it/s]
Processing TVP23C--CDRT4:  47%|████▋     | 7/15 [00:00<00:00,  9.57it/s]
Processing STX16--NPEPL1:  47%|████▋     | 7/15 [00:00<00:00,  9.57it/s]
Processing STX16--NPEPL1:  53%|█████▎    | 8/15 [00:00<00:00,  9.57it/s]
Processing SSH2--AC022816.1:  53%|█████▎    | 8/15 [00:00<00:00,  9.57it/s]
Processing SSH2--AC022816.1:  60%|██████    | 9/15 [00:00<00:00,  9.58it/s]
Processing SSH2--RPS18P12:  60%|██████    | 9/15 [00:00<00:00,  9.58it/s]  
Processing SSH2--RPS18P12:  67%|██████▋   | 10/15 [00:01<00:00,  9.58it/s]
Processing PCDHA3--PCDHAC1:  67%|██████▋   | 10/15 [00:01<00:00,  9.58it/s]
Processing PCDHA3--PCDHAC1:  73%|███████▎  | 11/15 [00:01<00:00,  9.58it/s]
Processing PCDHA3--PCDHAC2:  73%|███████▎  | 11/15 [00:01<00:00,  9.58it/s]
Processing PCDHA3--PCDHAC2:  80%|████████  | 12/15 [00:01<00:00,  9.57it/s]
Processing PCDHA3--PCDHA13:  80%|████████  | 12/15 [00:01<00:00,  9.57it/s]
Processing PCDHA3--PCDHA13:  87%|████████▋ | 13/15 [00:01<00:00,  9.57it/s]
Processing CASK--RRBP1:  87%|████████▋ | 13/15 [00:01<00:00,  9.57it/s]    
Processing CASK--RRBP1:  93%|█████████▎| 14/15 [00:01<00:00,  9.56it/s]
Processing CASK--BANF2:  93%|█████████▎| 14/15 [00:01<00:00,  9.56it/s]
Processing CASK--BANF2: 100%|██████████| 15/15 [00:01<00:00,  9.57it/s]
Processing CASK--BANF2: 100%|██████████| 15/15 [00:01<00:00,  9.54it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory