AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 223
Pass (FILTER=PASS): 29 (13.0%)
Fail (FILTER=FAIL): 194 (87.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 81
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 24
confidence_below_min(low<high): 21
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 2
Breakdown by confidence:
high: 29 pass, 3 fail (total: 32)
low: 0 pass, 88 fail (total: 88)
medium: 0 pass, 103 fail (total: 103)
Arriba filter: 223 rows -> 29 PASS; wrote tih_rna_sample_00758_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00758_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00758_B23MVV7LT4_1.arriba.fusions.filter_summary.txt