.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (tih_rna_sample_00574_B23MVV7LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/72376a10c7c31d4cbae033125cd11c/.command.err
Size: 557 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (tih_rna_sample_00574_B23MVV7LT4_1)
Attempt

Content

Processing Kallisto file: tih_rna_sample_00574_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00574_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00574_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00574_B23MVV7LT4_1
  Mean Fragment Length: 148.1 bp
  Median Fragment Length: 135.0 bp
  pct_mito_est_counts: 0.017%
  pct_ribo_est_counts: 0.691%
  pct_hk_est_counts: 0.338%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.041%
  pct_ribo_tpm: 2.27%
  pct_hk_tpm: 0.532%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.001%