AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 79
Pass (FILTER=PASS): 10 (12.7%)
Fail (FILTER=FAIL): 69 (87.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high): 10
confidence_below_min(medium<high): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 4
total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
total_reads_below_min(3.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
total_reads_below_min(3.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 10 pass, 7 fail (total: 17)
low: 0 pass, 30 fail (total: 30)
medium: 0 pass, 32 fail (total: 32)
Arriba filter: 79 rows -> 10 PASS; wrote tih_rna_sample_00666_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00666_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00666_B23MVV7LT4_1.arriba.fusions.filter_summary.txt