.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (tih_rna_sample_00574_B23MVV7LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/f63a13c0013a300576a2a862b63910/.command.err
Size: 11.6 KB
Task: NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (tih_rna_sample_00574_B23MVV7LT4_1)
Attempt
Content

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Processing TLK2--AC240565.1:  15%|█▍        | 10/68 [00:01<00:06,  9.64it/s]
Processing TLK2--AC240565.1:  16%|█▌        | 11/68 [00:01<00:05,  9.64it/s]
Processing GNA13--BPTF:  16%|█▌        | 11/68 [00:01<00:05,  9.64it/s]     
Processing GNA13--BPTF:  18%|█▊        | 12/68 [00:01<00:05,  9.64it/s]
Processing NFE2L2--PDE11A:  18%|█▊        | 12/68 [00:01<00:05,  9.64it/s]
Processing NFE2L2--PDE11A:  19%|█▉        | 13/68 [00:01<00:05,  9.64it/s]
Processing GLI3--AC034187.1:  19%|█▉        | 13/68 [00:01<00:05,  9.64it/s]
Processing GLI3--AC034187.1:  21%|██        | 14/68 [00:01<00:05,  9.64it/s]
Processing DDTL--CCDC117:  21%|██        | 14/68 [00:01<00:05,  9.64it/s]   
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Processing DDT--CCDC117:  24%|██▎       | 16/68 [00:01<00:05,  9.64it/s]
Processing RNA5SP150--MIGA1:  24%|██▎       | 16/68 [00:01<00:05,  9.64it/s]
Processing RNA5SP150--MIGA1:  25%|██▌       | 17/68 [00:01<00:05,  9.64it/s]
Processing RHPN2--RGS9:  25%|██▌       | 17/68 [00:01<00:05,  9.64it/s]     
Processing RHPN2--RGS9:  26%|██▋       | 18/68 [00:01<00:05,  9.64it/s]
Processing TAX1BP1--AC007130.1:  26%|██▋       | 18/68 [00:01<00:05,  9.64it/s]
Processing TAX1BP1--AC007130.1:  28%|██▊       | 19/68 [00:01<00:05,  9.64it/s]
Processing NFE2L2--CYCTP:  28%|██▊       | 19/68 [00:01<00:05,  9.64it/s]      
Processing NFE2L2--CYCTP:  29%|██▉       | 20/68 [00:02<00:04,  9.63it/s]
Processing MIR4713HG--GLDN:  29%|██▉       | 20/68 [00:02<00:04,  9.63it/s]
Processing MIR4713HG--GLDN:  31%|███       | 21/68 [00:02<00:04,  9.63it/s]
Processing AC091132.4--AC091132.1:  31%|███       | 21/68 [00:02<00:04,  9.63it/s]
Processing AC091132.4--AC091132.1:  32%|███▏      | 22/68 [00:02<00:04,  9.64it/s]
Processing TBK1--SRGAP1:  32%|███▏      | 22/68 [00:02<00:04,  9.64it/s]          
Processing TBK1--SRGAP1:  34%|███▍      | 23/68 [00:02<00:04,  9.64it/s]
Processing ERBB4--ERBB4:  34%|███▍      | 23/68 [00:02<00:04,  9.64it/s]
Processing ERBB4--ERBB4:  35%|███▌      | 24/68 [00:02<00:04,  9.64it/s]
Processing FGFR3--LETM1:  35%|███▌      | 24/68 [00:02<00:04,  9.64it/s]
Processing FGFR3--LETM1:  37%|███▋      | 25/68 [00:02<00:04,  9.64it/s]
Processing RBM14--RBM4:  37%|███▋      | 25/68 [00:02<00:04,  9.64it/s] 
Processing RBM14--RBM4:  38%|███▊      | 26/68 [00:02<00:04,  9.64it/s]
Processing ESR1--RRM2B:  38%|███▊      | 26/68 [00:02<00:04,  9.64it/s]
Processing ESR1--RRM2B:  40%|███▉      | 27/68 [00:02<00:04,  9.64it/s]
Processing PCDHGA5--PCDHGA8:  40%|███▉      | 27/68 [00:02<00:04,  9.64it/s]
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Processing PCDHGA5--PCDHGC4:  46%|████▌     | 31/68 [00:03<00:03,  9.64it/s] 
Processing PCDHGA5--PCDHGC4:  47%|████▋     | 32/68 [00:03<00:03,  9.64it/s]
Processing PCDHGA5--PCDHGB6:  47%|████▋     | 32/68 [00:03<00:03,  9.64it/s]
Processing PCDHGA5--PCDHGB6:  49%|████▊     | 33/68 [00:03<00:03,  9.64it/s]
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Processing PCDHGA5--PCDHGB7:  50%|█████     | 34/68 [00:03<00:03,  9.64it/s]
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Processing PCDHGA5--PCDHGA12:  51%|█████▏    | 35/68 [00:03<00:03,  9.64it/s]
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Processing PCDHGB2--PCDHGA8:  54%|█████▍    | 37/68 [00:03<00:03,  9.64it/s]
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Processing PCDHGB2--PCDHGA10:  60%|██████    | 41/68 [00:04<00:02,  9.64it/s]
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Processing TVP23C--CDRT4:  69%|██████▉   | 47/68 [00:04<00:02,  9.64it/s]   
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Processing FRY--UACA:  74%|███████▎  | 50/68 [00:05<00:01,  9.63it/s]
Processing CRK--NTRK3:  74%|███████▎  | 50/68 [00:05<00:01,  9.63it/s]
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Processing AGO3--AGO1:  76%|███████▋  | 52/68 [00:05<00:01,  9.64it/s]
Processing TAF4--CDH4:  76%|███████▋  | 52/68 [00:05<00:01,  9.64it/s]
Processing TAF4--CDH4:  78%|███████▊  | 53/68 [00:05<00:01,  9.64it/s]
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Processing KLRC4--KLRK1:  79%|███████▉  | 54/68 [00:05<00:01,  9.64it/s]
Processing DDHD2--ADAM2:  79%|███████▉  | 54/68 [00:05<00:01,  9.64it/s]
Processing DDHD2--ADAM2:  81%|████████  | 55/68 [00:05<00:01,  9.64it/s]
Processing LMBR1--ESYT2:  81%|████████  | 55/68 [00:05<00:01,  9.64it/s]
Processing LMBR1--ESYT2:  82%|████████▏ | 56/68 [00:05<00:01,  9.64it/s]
Processing LMBR1--DYNC2I1:  82%|████████▏ | 56/68 [00:05<00:01,  9.64it/s]
Processing LMBR1--DYNC2I1:  84%|████████▍ | 57/68 [00:05<00:01,  9.64it/s]
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Processing PCDHA4--PCDHA13:  87%|████████▋ | 59/68 [00:06<00:00,  9.64it/s]
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Processing ZDHHC17--PLD1:  97%|█████████▋| 66/68 [00:06<00:00,  9.63it/s]  
Processing ZDHHC17--PLD1:  99%|█████████▊| 67/68 [00:06<00:00,  9.62it/s]
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Processing TLK2--BET1L: 100%|██████████| 68/68 [00:07<00:00,  9.63it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory