AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 332
Pass (FILTER=PASS): 49 (14.8%)
Fail (FILTER=FAIL): 283 (85.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 73
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 41
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 30
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 15
confidence_below_min(low<high): 14
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
Breakdown by confidence:
high: 49 pass, 8 fail (total: 57)
low: 0 pass, 122 fail (total: 122)
medium: 0 pass, 153 fail (total: 153)
Arriba filter: 332 rows -> 49 PASS; wrote tih_rna_sample_00596_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00596_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00596_B23MVV7LT4_1.arriba.fusions.filter_summary.txt