Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/f6b41a64c9f5860de6113ac0f663ab/tih_rna_sample_00701_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/2ef70cf7065bd9d936d0ee3996e6f0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/2ef70cf7065bd9d936d0ee3996e6f0/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory