AIH curated blacklist: matched 14 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 292
Pass (FILTER=PASS): 5 (1.7%)
Fail (FILTER=FAIL): 287 (98.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 14
All 14 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 81
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 53
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 31
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 20
confidence_below_min(low<high): 19
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(medium<high);aih_curated_blacklist: 7
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
aih_curated_blacklist: 2
Breakdown by confidence:
high: 5 pass, 4 fail (total: 9)
low: 0 pass, 151 fail (total: 151)
medium: 0 pass, 132 fail (total: 132)
Arriba filter: 292 rows -> 5 PASS; wrote tih_rna_sample_00739_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00739_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00739_B23MVV7LT4_1.arriba.fusions.filter_summary.txt