Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/3cb9fa651988a2dbf39dc082d3b15d/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/3cb9fa651988a2dbf39dc082d3b15d/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f9/0e201f0255b51ccc6c52864a1766dd/FFPE_HD789_01_RNA_13_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/b20793133ae036a6ff9d89481df6f1/FFPE_HD789_01_RNA_13_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: FFPE_HD789_01_RNA_13_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai Load BAM file ... Done