AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 218
Pass (FILTER=PASS): 16 (7.3%)
Fail (FILTER=FAIL): 202 (92.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 62
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 24
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 17
confidence_below_min(low<high): 16
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
Breakdown by confidence:
high: 16 pass, 4 fail (total: 20)
low: 0 pass, 90 fail (total: 90)
medium: 0 pass, 108 fail (total: 108)
Arriba filter: 218 rows -> 16 PASS; wrote tih_rna_sample_00729_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00729_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00729_B23MVV7LT4_1.arriba.fusions.filter_summary.txt