AIH curated blacklist: matched 16 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 367
Pass (FILTER=PASS): 40 (10.9%)
Fail (FILTER=FAIL): 327 (89.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 16
All 16 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 112
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 43
confidence_below_min(low<high): 25
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
Breakdown by confidence:
high: 40 pass, 10 fail (total: 50)
low: 0 pass, 141 fail (total: 141)
medium: 0 pass, 176 fail (total: 176)
Arriba filter: 367 rows -> 40 PASS; wrote tih_rna_sample_00721_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00721_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00721_B23MVV7LT4_1.arriba.fusions.filter_summary.txt