.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (tih_rna_sample_00586_B23MVV7LT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/38bea92e0d679713aee300d6cbf901/.command.log
Size: 716 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (tih_rna_sample_00586_B23MVV7LT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/38bea92e0d679713aee300d6cbf901/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/024336e116bc083ef08a44cd1b0a70/tih_rna_sample_00586_B23MVV7LT4_1.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/38bea92e0d679713aee300d6cbf901/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/024336e116bc083ef08a44cd1b0a70/tih_rna_sample_00586_B23MVV7LT4_1.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 tih_rna_sample_00586_B23MVV7LT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: tih_rna_sample_00586_B23MVV7LT4_1.md.bai