File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/18ead07e6f265b2eaacbe3113a3fcd/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:18:31
                             Started mapping on |	Jun 08 10:24:54
                                    Finished on |	Jun 08 11:21:43
       Mapping speed, Million of reads per hour |	312.39

                          Number of input reads |	295812390
                      Average input read length |	267
                                    UNIQUE READS:
                   Uniquely mapped reads number |	280159418
                        Uniquely mapped reads % |	94.71%
                          Average mapped length |	266.45
                       Number of splices: Total |	345171146
            Number of splices: Annotated (sjdb) |	340368376
                       Number of splices: GT/AG |	340914070
                       Number of splices: GC/AG |	2548051
                       Number of splices: AT/AC |	356507
               Number of splices: Non-canonical |	1352518
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.92
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.66
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	12108743
             % of reads mapped to multiple loci |	4.09%
        Number of reads mapped to too many loci |	324521
             % of reads mapped to too many loci |	0.11%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2853249
                 % of reads unmapped: too short |	0.96%
                Number of reads unmapped: other |	366459
                     % of reads unmapped: other |	0.12%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%