.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (tih_rna_sample_00575_B23MVV7LT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/fabc4cad2eb2640be9dc43783fd20a/.command.log
Size: 1.2 KB
Task: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (tih_rna_sample_00575_B23MVV7LT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/1a9111bf87a4c56bbb682c85031a34/tih_rna_sample_00575_B23MVV7LT4_1_fusionreport_index.html
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/fabc4cad2eb2640be9dc43783fd20a/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/hgnc_complete_set.txt
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/HGNC-DB-timestamp.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/48e1a8acd66a786443a118575cbf70/tih_rna_sample_00575_B23MVV7LT4_1.FusionInspector.fusions.abridged.tsv.annotated.coding_effect
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/1a9111bf87a4c56bbb682c85031a34/tih_rna_sample_00575_B23MVV7LT4_1.fusions.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/fabc4cad2eb2640be9dc43783fd20a/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/d18bad769c52a187db994aea4b113f/tih_rna_sample_00575_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/dae028ae9805ce55e56b769a05fd6c/tih_rna_sample_00575_B23MVV7LT4_1.tsv
==> STAGING COMPLETE (9 inputs)