Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/daa8e7c9d7f4d9d71b1b1ad8dc35d8/tih_rna_sample_00582_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-7324c8a8-f474-426a-a5c9-715912777f94/c4/140ab148cdcf1ed9bdffe91f534e47/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/abbb5f0adeea0d6f10a5207c55f2c1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/abbb5f0adeea0d6f10a5207c55f2c1/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/69029b5a1ebdfb6bdca6a977848e10/tih_rna_sample_00582_B23MVV7LT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
RABL6--DAPK1
starfusion
arriba
PRSS27--TPSB2
starfusion
TLK2P1--AC110079.1
starfusion
SUSD1--CORO2A
starfusion
arriba
TLK2--AC240565.1
starfusion
TVP23C--CDRT4
arriba
AP001347.1--ANKRD20A11P
arriba
ABCA2--AOPEP
arriba
EFL1--GOLGA6L11P
arriba
KLRC4--KLRK1
arriba
COLGALT1--AK6P1
arriba
COLGALT1--ZNF970P
arriba

  0%|          | 0/12 [00:00<?, ?it/s]
Processing RABL6--DAPK1:   0%|          | 0/12 [00:00<?, ?it/s]
Processing RABL6--DAPK1:   8%|▊         | 1/12 [00:00<00:01,  9.25it/s]
Processing PRSS27--TPSB2:   8%|▊         | 1/12 [00:00<00:01,  9.25it/s]
Processing PRSS27--TPSB2:  17%|█▋        | 2/12 [00:00<00:01,  9.48it/s]
Processing TLK2P1--AC110079.1:  17%|█▋        | 2/12 [00:00<00:01,  9.48it/s]
Processing TLK2P1--AC110079.1:  25%|██▌       | 3/12 [00:00<00:00,  9.56it/s]
Processing SUSD1--CORO2A:  25%|██▌       | 3/12 [00:00<00:00,  9.56it/s]     
Processing SUSD1--CORO2A:  33%|███▎      | 4/12 [00:00<00:00,  9.59it/s]
Processing TLK2--AC240565.1:  33%|███▎      | 4/12 [00:00<00:00,  9.59it/s]
Processing TLK2--AC240565.1:  42%|████▏     | 5/12 [00:00<00:00,  9.62it/s]
Processing TVP23C--CDRT4:  42%|████▏     | 5/12 [00:00<00:00,  9.62it/s]   
Processing TVP23C--CDRT4:  50%|█████     | 6/12 [00:00<00:00,  9.62it/s]
Processing AP001347.1--ANKRD20A11P:  50%|█████     | 6/12 [00:00<00:00,  9.62it/s]
Processing AP001347.1--ANKRD20A11P:  58%|█████▊    | 7/12 [00:00<00:00,  9.63it/s]
Processing ABCA2--AOPEP:  58%|█████▊    | 7/12 [00:00<00:00,  9.63it/s]           
Processing ABCA2--AOPEP:  67%|██████▋   | 8/12 [00:00<00:00,  9.64it/s]
Processing EFL1--GOLGA6L11P:  67%|██████▋   | 8/12 [00:00<00:00,  9.64it/s]
Processing EFL1--GOLGA6L11P:  75%|███████▌  | 9/12 [00:00<00:00,  9.64it/s]
Processing KLRC4--KLRK1:  75%|███████▌  | 9/12 [00:00<00:00,  9.64it/s]    
Processing KLRC4--KLRK1:  83%|████████▎ | 10/12 [00:01<00:00,  9.64it/s]
Processing COLGALT1--AK6P1:  83%|████████▎ | 10/12 [00:01<00:00,  9.64it/s]
Processing COLGALT1--AK6P1:  92%|█████████▏| 11/12 [00:01<00:00,  9.65it/s]
Processing COLGALT1--ZNF970P:  92%|█████████▏| 11/12 [00:01<00:00,  9.65it/s]
Processing COLGALT1--ZNF970P: 100%|██████████| 12/12 [00:01<00:00,  9.65it/s]
Processing COLGALT1--ZNF970P: 100%|██████████| 12/12 [00:01<00:00,  9.61it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory