File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/6ecbbe55900d619004f76480a58d00/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:07:59
                             Started mapping on |	Jun 08 10:14:41
                                    Finished on |	Jun 08 11:11:18
       Mapping speed, Million of reads per hour |	314.25

                          Number of input reads |	296530329
                      Average input read length |	268
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284340158
                        Uniquely mapped reads % |	95.89%
                          Average mapped length |	267.21
                       Number of splices: Total |	345129945
            Number of splices: Annotated (sjdb) |	340440543
                       Number of splices: GT/AG |	340924109
                       Number of splices: GC/AG |	2706279
                       Number of splices: AT/AC |	272445
               Number of splices: Non-canonical |	1227112
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.85
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.61
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8815226
             % of reads mapped to multiple loci |	2.97%
        Number of reads mapped to too many loci |	355053
             % of reads mapped to too many loci |	0.12%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2647963
                 % of reads unmapped: too short |	0.89%
                Number of reads unmapped: other |	371929
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%