.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (tih_rna_sample_00584_B23MVV7LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/534e1a4e09f423e930b899c44f1595/.command.err
Size: 556 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (tih_rna_sample_00584_B23MVV7LT4_1)
Attempt

Content

Processing Kallisto file: tih_rna_sample_00584_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00584_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00584_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00584_B23MVV7LT4_1
  Mean Fragment Length: 115.3 bp
  Median Fragment Length: 109.0 bp
  pct_mito_est_counts: 0.006%
  pct_ribo_est_counts: 0.55%
  pct_hk_est_counts: 0.205%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.014%
  pct_ribo_tpm: 1.814%
  pct_hk_tpm: 0.36%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.005%