File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/534e1a4e09f423e930b899c44f1595/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/b093d1aeb296adb117aec924095bdf/tih_rna_sample_00584_B23MVV7LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/534e1a4e09f423e930b899c44f1595/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/534e1a4e09f423e930b899c44f1595/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/f2182e29afd7456cc6ee219e21b18f/tih_rna_sample_00584_B23MVV7LT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: tih_rna_sample_00584_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00584_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00584_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00584_B23MVV7LT4_1
  Mean Fragment Length: 115.3 bp
  Median Fragment Length: 109.0 bp
  pct_mito_est_counts: 0.006%
  pct_ribo_est_counts: 0.55%
  pct_hk_est_counts: 0.205%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.014%
  pct_ribo_tpm: 1.814%
  pct_hk_tpm: 0.36%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.005%