AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 137
Pass (FILTER=PASS): 11 (8.0%)
Fail (FILTER=FAIL): 126 (92.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 44
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 24
confidence_below_min(low<high): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(4.0<8.0): 1
Breakdown by confidence:
high: 11 pass, 2 fail (total: 13)
low: 0 pass, 46 fail (total: 46)
medium: 0 pass, 78 fail (total: 78)
Arriba filter: 137 rows -> 11 PASS; wrote tih_rna_sample_00690_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00690_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00690_B23MVV7LT4_1.arriba.fusions.filter_summary.txt