AIH curated blacklist: matched 8 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 315
Pass (FILTER=PASS): 40 (12.7%)
Fail (FILTER=FAIL): 275 (87.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 8
All 8 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 58
confidence_below_min(medium<high): 57
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 35
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 23
confidence_below_min(low<high): 20
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 40 pass, 4 fail (total: 44)
low: 0 pass, 138 fail (total: 138)
medium: 0 pass, 133 fail (total: 133)
Arriba filter: 315 rows -> 40 PASS; wrote tih_rna_sample_00693_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00693_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00693_B23MVV7LT4_1.arriba.fusions.filter_summary.txt