Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/c6f620b1cb7837750dd4c4e1be4728/tih_rna_sample_00764_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/e608c3afd573d567caefa517ca56bd/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/e608c3afd573d567caefa517ca56bd/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory