Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/23ef306beb0319e34a6817ea6424f3/tih_rna_sample_00678_B23MVV7LT4_1_2.fastp.fastq.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/7fd802b387f5688ecd139a073462c8/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/1171e2d3964a6569ac5e41a5e36fff/tih_rna_sample_00678_B23MVV7LT4_1.Chimeric.out.junction Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/7fd802b387f5688ecd139a073462c8/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/23ef306beb0319e34a6817ea6424f3/tih_rna_sample_00678_B23MVV7LT4_1_1.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.BecFL8UWlB/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary -sample contains 154820398 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir -J /tmp/nxf.BecFL8UWlB/tih_rna_sample_00678_B23MVV7LT4_1.Chimeric.out.junction -O /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.BecFL8UWlB/tih_rna_sample_00678_B23MVV7LT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=100000.00/min [30000], rate=94736.84/min [40000], rate=92307.69/min [50000], rate=93750.00/min [60000], rate=85714.29/min [70000], rate=60869.57/min [80000], rate=52747.25/min [90000], rate=47368.42/min [100000], rate=45112.78/min [110000], rate=40993.79/min [120000], rate=40000.00/min [130000], rate=39393.94/min [140000], rate=39069.77/min [150000], rate=38626.61/min [160000], rate=38709.68/min [170000], rate=38636.36/min [180000], rate=38709.68/min [190000], rate=38907.85/min [200000], rate=39344.26/min [210000], rate=39498.43/min [220000], rate=39639.64/min [230000], rate=39769.45/min [240000], rate=40111.42/min [250000], rate=40431.27/min [260000], rate=40837.70/min [270000], rate=41221.37/min [280000], rate=41687.34/min [290000], rate=42335.77/min [300000], rate=42857.14/min [310000], rate=43457.94/min [320000], rate=44137.93/min [330000], rate=44695.26/min [340000], rate=45333.33/min [350000], rate=45851.53/min [360000], rate=46451.61/min [370000], rate=47033.90/min [380000], rate=47599.16/min [390000], rate=48247.42/min [400000], rate=48979.59/min [410000], rate=49696.97/min [420000], rate=50400.00/min [430000], rate=51190.48/min [440000], rate=51968.50/min [450000], rate=51923.08/min [460000], rate=51111.11/min [470000], rate=50357.14/min [480000], rate=50000.00/min [490000], rate=49578.41/min [500000], rate=49180.33/min [510000], rate=48960.00/min [520000], rate=48673.95/min [530000], rate=48549.62/min [540000], rate=48286.14/min [550000], rate=48175.18/min [560000], rate=48137.54/min [570000], rate=47899.16/min [580000], rate=47802.20/min [590000], rate=47644.68/min [600000], rate=47556.14/min [610000], rate=47656.25/min [620000], rate=47753.53/min [630000], rate=47787.61/min [640000], rate=47880.30/min [650000], rate=47911.55/min [660000], rate=47941.89/min [670000], rate=48086.12/min [680000], rate=48170.01/min [690000], rate=48364.49/min [700000], rate=48554.91/min [710000], rate=48741.42/min [720000], rate=48979.59/min [730000], rate=49158.25/min [740000], rate=49388.21/min [750000], rate=49668.87/min [760000], rate=50054.88/min [770000], rate=50381.68/min [780000], rate=50649.35/min [790000], rate=50967.74/min [800000], rate=51227.32/min [810000], rate=51483.05/min [820000], rate=51143.45/min [830000], rate=51446.28/min [840000], rate=51692.31/min [850000], rate=52040.82/min [860000], rate=52173.91/min [870000], rate=52200.00/min [880000], rate=52329.04/min [890000], rate=52404.32/min [900000], rate=52073.29/min [910000], rate=52099.24/min [920000], rate=51830.99/min [930000], rate=51286.76/min [940000], rate=50902.53/min [950000], rate=50892.86/min [960000], rate=50526.32/min [970000], rate=50564.73/min [980000], rate=50602.41/min [990000], rate=50812.66/min [1000000], rate=51063.83/min [1010000], rate=51269.04/min [1020000], rate=51515.15/min [1030000], rate=51889.17/min [1040000], rate=52173.91/min [1050000], rate=52543.79/min [1060000], rate=52867.83/min [1070000], rate=52926.63/min [1080000], rate=52984.46/min [1090000], rate=52741.94/min [1100000], rate=52969.50/min [1110000], rate=53110.05/min [1120000], rate=53375.69/min [1130000], rate=53596.84/min [1140000], rate=53900.71/min [1150000], rate=54245.28/min [1160000], rate=54502.74/min [1170000], rate=54672.90/min [1180000], rate=54756.38/min [1190000], rate=54796.62/min [1200000], rate=54961.83/min [1210000], rate=54751.13/min [1220000], rate=54790.42/min [1230000], rate=54747.77/min [1240000], rate=54786.45/min [1250000], rate=54585.15/min [1260000], rate=54663.77/min [1270000], rate=54467.48/min [1280000], rate=54275.62/min [1290000], rate=53862.21/min [1300000], rate=53830.23/min [1310000], rate=54020.62/min [1320000], rate=54246.58/min [1330000], rate=54508.20/min [1340000], rate=54545.45/min [1350000], rate=54729.73/min [1360000], rate=54949.49/min [1370000], rate=55130.78/min [1380000], rate=55310.62/min [1390000], rate=55452.13/min [1400000], rate=55629.14/min [1410000], rate=55767.96/min [1420000], rate=55942.22/min [1430000], rate=56151.83/min [1440000], rate=56433.70/min [1450000], rate=56640.62/min [1460000], rate=56846.20/min [1470000], rate=56976.74/min [1480000], rate=57032.76/min [1490000], rate=57124.60/min [1500000], rate=57251.91/min [1510000], rate=57414.45/min [1520000], rate=57503.15/min [1530000], rate=57699.56/min [1540000], rate=57822.28/min [1550000], rate=57980.05/min [1560000], rate=58100.56/min [1570000], rate=58256.03/min [1580000], rate=58374.38/min [1590000], rate=58312.96/min [1600000], rate=57936.03/min [1610000], rate=57568.53/min [1620000], rate=57311.32/min [1630000], rate=57059.51/min [1640000], rate=56845.75/min [1650000], rate=56668.57/min [1660000], rate=56334.84/min [1670000], rate=55728.59/min [1680000], rate=55142.23/min [1690000], rate=54574.81/min [1700000], rate=54197.66/min [1710000], rate=53801.78/min [1720000], rate=53666.15/min [1730000], rate=53532.75/min [1740000], rate=53428.86/min [1750000], rate=53380.78/min -building interval tree based on /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=31578.95/min [20000], rate=40000.00/min [30000], rate=43902.44/min [40000], rate=47058.82/min [50000], rate=49180.33/min [60000], rate=51428.57/min [70000], rate=54545.45/min [80000], rate=57831.33/min [90000], rate=61363.64/min [100000], rate=64516.13/min [110000], rate=66666.67/min [120000], rate=63157.89/min [130000], rate=60000.00/min [140000], rate=57931.03/min [150000], rate=56250.00/min [160000], rate=54545.45/min [170000], rate=53403.14/min [180000], rate=52941.18/min [190000], rate=52777.78/min [200000], rate=52631.58/min [210000], rate=52941.18/min [220000], rate=51562.50/min [230000], rate=52075.47/min [240000], rate=52941.18/min [250000], rate=53763.44/min [260000], rate=54545.45/min [270000], rate=55290.10/min [280000], rate=55629.14/min [290000], rate=54545.45/min [300000], rate=53571.43/min [310000], rate=53142.86/min [320000], rate=52459.02/min [330000], rate=51968.50/min [340000], rate=51776.65/min [350000], rate=51597.05/min [360000], rate=51674.64/min [370000], rate=51748.25/min [380000], rate=51818.18/min [390000], rate=52000.00/min [400000], rate=52287.58/min [410000], rate=52676.66/min [420000], rate=53052.63/min [430000], rate=53526.97/min [440000], rate=53987.73/min [450000], rate=54435.48/min [460000], rate=54870.78/min [470000], rate=55294.12/min [480000], rate=55813.95/min [490000], rate=56214.15/min [500000], rate=56710.78/min [510000], rate=57196.26/min [520000], rate=57458.56/min [530000], rate=57504.52/min [540000], rate=56942.00/min [550000], rate=56410.26/min [560000], rate=56000.00/min [570000], rate=55429.50/min [580000], rate=55150.55/min [590000], rate=54798.76/min [600000], rate=54380.66/min [610000], rate=54062.04/min [620000], rate=53679.65/min [630000], rate=53465.35/min [640000], rate=53259.36/min [650000], rate=52989.13/min [660000], rate=52729.69/min [670000], rate=52686.76/min [680000], rate=52374.84/min [690000], rate=52338.81/min [700000], rate=52434.46/min [710000], rate=52527.74/min [720000], rate=52618.76/min [730000], rate=52898.55/min [740000], rate=53237.41/min [750000], rate=53444.18/min [760000], rate=53710.25/min [770000], rate=54035.09/min [780000], rate=54292.34/min [790000], rate=54671.28/min [800000], rate=54483.54/min [810000], rate=54060.07/min [820000], rate=53594.77/min [830000], rate=53148.35/min [840000], rate=52830.19/min [850000], rate=52523.17/min [860000], rate=52332.66/min [870000], rate=52357.07/min [880000], rate=52122.41/min [890000], rate=52046.78/min [900000], rate=51973.05/min [910000], rate=51950.52/min [920000], rate=51637.04/min [930000], rate=51571.16/min [940000], rate=51695.69/min [950000], rate=51724.14/min [960000], rate=51752.02/min [970000], rate=51779.36/min [980000], rate=51715.04/min [990000], rate=51787.27/min [1000000], rate=51768.77/min [1010000], rate=51928.02/min [1020000], rate=52040.82/min [1030000], rate=52107.93/min [1040000], rate=52305.11/min [1050000], rate=52500.00/min [1060000], rate=52388.80/min [1070000], rate=52068.13/min [1080000], rate=52258.06/min [1090000], rate=52487.96/min [1100000], rate=52715.65/min [1110000], rate=52983.29/min [1120000], rate=53122.53/min [1130000], rate=53343.82/min [1140000], rate=53271.03/min [1150000], rate=52995.39/min [1160000], rate=52887.54/min [1170000], rate=52821.67/min [1180000], rate=52444.44/min [1190000], rate=51626.90/min [1200000], rate=50919.38/min [1210000], rate=50486.79/min [1220000], rate=50482.76/min [1230000], rate=50409.84/min [1240000], rate=50509.16/min [1250000], rate=50675.68/min [1260000], rate=50806.45/min [1270000], rate=50969.90/min [1280000], rate=51165.89/min [1290000], rate=51394.42/min [1300000], rate=51689.86/min [1310000], rate=51984.13/min [1320000], rate=52311.76/min [1330000], rate=52569.17/min [1340000], rate=52755.91/min [1350000], rate=52529.18/min [1360000], rate=52240.72/min [1370000], rate=52190.48/min [1380000], rate=52173.91/min [1390000], rate=52157.60/min [1400000], rate=52238.81/min [1410000], rate=52254.48/min [1420000], rate=52269.94/min [1430000], rate=52317.07/min [1440000], rate=52427.18/min [1450000], rate=52504.53/min [1460000], rate=52581.03/min [1470000], rate=52719.67/min [1480000], rate=52825.70/min [1490000], rate=52962.09/min [1500000], rate=53066.04/min [1510000], rate=53200.23/min [1520000], rate=53458.38/min [1530000], rate=53621.50/min [1540000], rate=53783.47/min [1550000], rate=53944.32/min [1560000], rate=54104.05/min [1570000], rate=54262.67/min [1580000], rate=54326.65/min [1590000], rate=54173.76/min [1600000], rate=53781.51/min [1610000], rate=53547.67/min [1620000], rate=53056.77/min [1630000], rate=52495.97/min [1640000], rate=52146.26/min [1650000], rate=51724.14/min [1660000], rate=51767.15/min [1670000], rate=51729.48/min [1680000], rate=51481.10/min [1690000], rate=51263.90/min [1700000], rate=51076.61/min [1710000], rate=50943.40/min [1720000], rate=50937.81/min [1730000], rate=50757.95/min [1740000], rate=50877.19/min [1750000], rate=50995.63/min -building interval tree based on /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=37500.00/min [20000], rate=38709.68/min [30000], rate=40000.00/min [40000], rate=38709.68/min [50000], rate=40540.54/min [60000], rate=41860.47/min [70000], rate=40776.70/min [80000], rate=41379.31/min [90000], rate=42187.50/min [100000], rate=44117.65/min [110000], rate=45517.24/min [120000], rate=46753.25/min [130000], rate=48447.20/min [140000], rate=49704.14/min [150000], rate=51428.57/min [160000], rate=53038.67/min [170000], rate=55135.14/min [180000], rate=56544.50/min [190000], rate=57575.76/min [200000], rate=57692.31/min [210000], rate=58333.33/min [220000], rate=58928.57/min [230000], rate=59740.26/min [240000], rate=60504.20/min [250000], rate=61475.41/min [260000], rate=61660.08/min [270000], rate=62548.26/min [280000], rate=62222.22/min [290000], rate=61702.13/min [300000], rate=61433.45/min [310000], rate=61184.21/min [320000], rate=61146.50/min [330000], rate=61300.31/min [340000], rate=61445.78/min [350000], rate=61583.58/min [360000], rate=62068.97/min [370000], rate=62535.21/min [380000], rate=62809.92/min [390000], rate=63414.63/min [400000], rate=63829.79/min [410000], rate=64397.91/min [420000], rate=64948.45/min [430000], rate=65648.85/min [440000], rate=65024.63/min [450000], rate=64593.30/min [460000], rate=64335.66/min [470000], rate=64090.91/min [480000], rate=63716.81/min [490000], rate=63636.36/min [500000], rate=63559.32/min [510000], rate=63485.48/min [520000], rate=63673.47/min [530000], rate=63855.42/min [540000], rate=64031.62/min [550000], rate=64327.49/min [560000], rate=64615.38/min [570000], rate=65019.01/min [580000], rate=65536.72/min [590000], rate=66292.13/min [600000], rate=66914.50/min [610000], rate=67279.41/min [620000], rate=67513.61/min [630000], rate=66549.30/min [640000], rate=65417.38/min [650000], rate=64356.44/min [660000], rate=63870.97/min [670000], rate=63507.11/min [680000], rate=62865.95/min [690000], rate=61791.04/min [700000], rate=61224.49/min [710000], rate=60944.21/min [720000], rate=60504.20/min [730000], rate=60247.59/min [740000], rate=60081.19/min [750000], rate=59840.43/min [760000], rate=59685.86/min [770000], rate=59612.90/min [780000], rate=58793.97/min [790000], rate=58808.93/min [800000], rate=58608.06/min [810000], rate=58413.46/min [820000], rate=58501.78/min [830000], rate=58588.24/min [840000], rate=58741.26/min [850000], rate=58823.53/min [860000], rate=58769.93/min [870000], rate=58585.86/min [880000], rate=58666.67/min [890000], rate=58488.50/min [900000], rate=58568.33/min [910000], rate=58646.62/min [920000], rate=58536.59/min [930000], rate=58368.20/min [940000], rate=58024.69/min [950000], rate=57926.83/min [960000], rate=58064.52/min [970000], rate=58083.83/min [980000], rate=58102.77/min [990000], rate=58235.29/min [1000000], rate=58195.93/min [1010000], rate=58101.63/min [1020000], rate=58009.48/min [1030000], rate=58082.71/min [1040000], rate=58100.56/min [1050000], rate=57798.17/min [1060000], rate=57245.72/min [1070000], rate=57270.29/min [1080000], rate=57345.13/min [1090000], rate=57418.79/min [1100000], rate=57591.62/min [1110000], rate=57662.34/min [1120000], rate=57289.00/min [1130000], rate=57360.41/min [1140000], rate=57575.76/min [1150000], rate=57261.41/min [1160000], rate=55635.49/min [1170000], rate=54800.94/min [1180000], rate=53717.75/min [1190000], rate=51965.07/min [1200000], rate=51063.83/min [1210000], rate=49760.11/min [1220000], rate=49492.90/min [1230000], rate=49331.55/min [1240000], rate=49173.83/min [1250000], rate=49083.77/min [1260000], rate=48963.73/min [1270000], rate=48908.86/min [1280000], rate=48886.06/min [1290000], rate=48863.64/min [1300000], rate=48841.58/min [1310000], rate=48789.57/min [1320000], rate=48768.47/min [1330000], rate=48628.88/min [1340000], rate=48028.67/min [1350000], rate=47563.12/min [1360000], rate=47331.79/min [1370000], rate=47106.02/min [1380000], rate=47179.49/min [1390000], rate=47252.12/min [1400000], rate=47350.62/min [1410000], rate=47368.42/min [1420000], rate=47491.64/min [1430000], rate=46936.54/min [1440000], rate=46702.70/min [1450000], rate=46424.76/min [1460000], rate=46202.53/min [1470000], rate=46323.53/min [1480000], rate=46394.98/min [1490000], rate=46417.45/min [1500000], rate=46511.63/min [1510000], rate=46580.98/min [1520000], rate=46649.62/min [1530000], rate=46693.79/min [1540000], rate=46784.81/min [1550000], rate=46875.00/min [1560000], rate=46940.82/min [1570000], rate=46912.35/min [1580000], rate=46837.94/min [1590000], rate=46856.58/min [1600000], rate=46875.00/min [1610000], rate=46893.20/min [1620000], rate=46956.52/min [1630000], rate=47064.49/min [1640000], rate=47149.02/min [1650000], rate=47187.80/min [1660000], rate=47315.91/min [1670000], rate=47420.73/min [1680000], rate=47524.75/min [1690000], rate=47672.78/min [1700000], rate=47819.97/min [1710000], rate=47966.34/min [1720000], rate=48089.47/min [1730000], rate=48211.80/min [1740000], rate=48288.62/min -building interval tree based on /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=133333.33/min [30000], rate=128571.43/min [40000], rate=141176.47/min [50000], rate=150000.00/min [60000], rate=150000.00/min [70000], rate=155555.56/min [80000], rate=154838.71/min [90000], rate=158823.53/min [100000], rate=146341.46/min [110000], rate=143478.26/min [120000], rate=138461.54/min [130000], rate=136842.11/min [140000], rate=133333.33/min [150000], rate=138461.54/min [160000], rate=139130.43/min [170000], rate=139726.03/min [180000], rate=140259.74/min [190000], rate=139024.39/min [200000], rate=137931.03/min [210000], rate=135483.87/min [220000], rate=136082.47/min [230000], rate=132692.31/min [240000], rate=133333.33/min [250000], rate=131578.95/min [260000], rate=134482.76/min [270000], rate=136134.45/min [280000], rate=136585.37/min [290000], rate=137007.87/min [300000], rate=137404.58/min [310000], rate=136764.71/min [320000], rate=134265.73/min [330000], rate=132885.91/min [340000], rate=130769.23/min [350000], rate=129629.63/min [360000], rate=130120.48/min [370000], rate=130588.24/min [380000], rate=130285.71/min [390000], rate=131460.67/min [400000], rate=132596.69/min [410000], rate=132972.97/min [420000], rate=124752.48/min [430000], rate=105306.12/min [440000], rate=91986.06/min [450000], rate=84375.00/min [460000], rate=77528.09/min [470000], rate=71755.73/min [480000], rate=68085.11/min [490000], rate=65771.81/min [500000], rate=62761.51/min [510000], rate=60117.88/min [520000], rate=56830.60/min [530000], rate=54545.45/min [540000], rate=52682.93/min [550000], rate=50535.99/min [560000], rate=48979.59/min [570000], rate=47566.06/min [580000], rate=46276.60/min [590000], rate=45268.54/min [600000], rate=44009.78/min [610000], rate=43058.82/min [620000], rate=42272.73/min [630000], rate=41629.96/min [640000], rate=40807.65/min [650000], rate=39714.87/min [660000], rate=38372.09/min [670000], rate=37996.22/min [680000], rate=37883.01/min [690000], rate=37466.06/min [700000], rate=37399.82/min [710000], rate=37401.23/min [720000], rate=37305.70/min [730000], rate=36930.86/min [740000], rate=36969.19/min [750000], rate=37037.04/min [760000], rate=37163.81/min [770000], rate=37228.04/min [780000], rate=37261.15/min [790000], rate=37322.83/min [800000], rate=36725.33/min [810000], rate=36214.61/min [820000], rate=35964.91/min [830000], rate=35622.32/min [840000], rate=35618.37/min [850000], rate=35664.34/min [860000], rate=35635.36/min [870000], rate=35728.95/min [880000], rate=35869.57/min [890000], rate=36008.09/min [900000], rate=36168.79/min [910000], rate=36063.41/min [920000], rate=36054.87/min [930000], rate=36257.31/min [940000], rate=36457.66/min [950000], rate=36655.95/min [960000], rate=36899.42/min [970000], rate=37093.69/min [980000], rate=37309.64/min [990000], rate=37571.16/min [1000000], rate=37735.85/min [1010000], rate=37616.39/min [1020000], rate=37500.00/min [1030000], rate=37273.82/min [1040000], rate=37253.73/min [1050000], rate=36928.49/min [1060000], rate=37041.35/min [1070000], rate=37195.83/min [1080000], rate=37370.24/min [1090000], rate=37543.05/min [1100000], rate=37692.75/min [1110000], rate=37819.42/min [1120000], rate=37987.56/min [1130000], rate=38132.73/min [1140000], rate=38297.87/min [1150000], rate=38461.54/min [1160000], rate=38623.75/min [1170000], rate=38784.53/min [1180000], rate=38604.14/min [1190000], rate=38532.11/min [1200000], rate=38523.27/min [1210000], rate=38433.03/min [1220000], rate=38405.04/min [1230000], rate=38139.53/min [1240000], rate=37997.96/min [1250000], rate=37878.79/min [1260000], rate=37894.74/min [1270000], rate=37891.60/min [1280000], rate=37944.66/min [1290000], rate=37978.41/min [1300000], rate=37809.02/min [1310000], rate=37861.27/min [1320000], rate=37894.74/min [1330000], rate=37837.84/min [1340000], rate=37605.24/min [1350000], rate=36918.87/min [1360000], rate=36428.57/min [1370000], rate=36371.68/min [1380000], rate=36331.72/min [1390000], rate=36308.23/min [1400000], rate=35974.30/min [1410000], rate=36000.00/min [1420000], rate=36055.86/min [1430000], rate=36095.92/min [1440000], rate=36150.63/min [1450000], rate=36219.82/min [1460000], rate=36168.46/min [1470000], rate=36147.54/min [1480000], rate=36185.82/min [1490000], rate=36208.99/min [1500000], rate=36246.48/min [1510000], rate=36327.19/min [1520000], rate=36407.19/min [1530000], rate=36500.99/min [1540000], rate=36608.56/min [1550000], rate=36700.87/min [1560000], rate=36806.92/min [1570000], rate=36912.23/min [1580000], rate=37016.79/min [1590000], rate=37135.07/min [1600000], rate=37252.62/min [1610000], rate=37398.37/min [1620000], rate=37528.96/min [1630000], rate=37658.84/min [1640000], rate=37715.60/min [1650000], rate=37642.59/min [1660000], rate=37528.26/min [1670000], rate=37485.97/min [1680000], rate=37416.48/min [1690000], rate=37403.17/min [1700000], rate=37376.33/min [1710000], rate=37377.05/min [1720000], rate=37377.76/min [1730000], rate=37378.47/min [1740000], rate=37405.95/min [1750000], rate=37406.48/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir --filt_file /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 0.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 10000000.00 reads per min processed... 7200000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5400000.00 reads per min processed... 5000000.00 reads per min processed... 4714285.71 reads per min processed... 4800000.00 reads per min processed... 4588235.29 reads per min processed... 4421052.63 reads per min processed... 4500000.00 reads per min processed... 4363636.36 reads per min processed... 4434782.61 reads per min processed... 4320000.00 reads per min processed... 4222222.22 reads per min processed... 4137931.03 reads per min processed... 4064516.13 reads per min processed... 4000000.00 reads per min processed... 3942857.14 reads per min processed... 4000000.00 reads per min processed... 3947368.42 reads per min processed... 3900000.00 reads per min processed... 3857142.86 reads per min processed... 3906976.74 reads per min processed... 3866666.67 reads per min processed... 3829787.23 reads per min processed... 3875000.00 reads per min processed... 3840000.00 reads per min processed... 3807692.31 reads per min processed... 3849056.60 reads per min processed... 3818181.82 reads per min processed... 3789473.68 reads per min processed... 3827586.21 reads per min processed... 3931034.48 reads per min processed... 3966101.69 reads per min processed... 4000000.00 reads per min processed... 4032786.89 reads per min processed... 4000000.00 reads per min processed... 3969230.77 reads per min processed... 4000000.00 reads per min processed... 3970588.24 reads per min processed... 3942857.14 reads per min processed... 3971830.99 reads per min processed... 3945205.48 reads per min processed... 3972972.97 reads per min processed... 3947368.42 reads per min processed... 3923076.92 reads per min processed... 3900000.00 reads per min processed... 3925925.93 reads per min processed... 3903614.46 reads per min processed... 3882352.94 reads per min processed... 3906976.74 reads per min processed... 3886363.64 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.BecFL8UWlB/tih_rna_sample_00678_B23MVV7LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -248803.690334 EM: Round [1] log likelihood: -248639.295953 EM: Round [2] log likelihood: -248575.858118 EM: Round [3] log likelihood: -248545.677144 EM: Round [4] log likelihood: -248529.893301 EM: Round [5] log likelihood: -248521.202674 EM: Round [6] log likelihood: -248516.212085 EM: Round [7] log likelihood: -248513.218297 EM: Round [8] log likelihood: -248511.337276 EM: Round [9] log likelihood: -248510.098789 EM: Round [10] log likelihood: -248509.245931 EM: Round [11] log likelihood: -248508.633985 EM: Round [12] log likelihood: -248508.178639 EM: Round [13] log likelihood: -248507.829005 EM: Round [14] log likelihood: -248507.553255 EM: Round [15] log likelihood: -248507.330783 EM: Round [16] log likelihood: -248507.147807 EM: Round [17] log likelihood: -248506.994832 EM: Round [18] log likelihood: -248506.865135 EM: Round [19] log likelihood: -248506.753844 EM: Round [20] log likelihood: -248506.657350 EM: Round [21] log likelihood: -248506.572931 EM: Round [22] log likelihood: -248506.498494 EM: Round [23] log likelihood: -248506.432407 EM: Round [24] log likelihood: -248506.373379 EM: Round [25] log likelihood: -248506.320376 EM: Round [26] log likelihood: -248506.272557 EM: Round [27] log likelihood: -248506.229233 EM: Round [28] log likelihood: -248506.189832 EM: Round [29] log likelihood: -248506.153876 EM: Round [30] log likelihood: -248506.120961 EM: Round [31] log likelihood: -248506.090743 EM: Round [32] log likelihood: -248506.062928 EM: Round [33] log likelihood: -248506.037261 EM: Round [34] log likelihood: -248506.013521 EM: Round [35] log likelihood: -248505.991516 EM: Round [36] log likelihood: -248505.971078 EM: Round [37] log likelihood: -248505.952058 EM: Round [38] log likelihood: -248505.934324 EM: Round [39] log likelihood: -248505.917759 EM: Round [40] log likelihood: -248505.902261 EM: Round [41] log likelihood: -248505.887736 EM: Round [42] log likelihood: -248505.874102 EM: Round [43] log likelihood: -248505.861284 EM: Round [44] log likelihood: -248505.849215 EM: Round [45] log likelihood: -248505.837836 EM: Round [46] log likelihood: -248505.827092 EM: Round [47] log likelihood: -248505.816933 EM: Round [48] log likelihood: -248505.807316 EM: Round [49] log likelihood: -248505.798200 EM: Round [50] log likelihood: -248505.789547 EM: Round [51] log likelihood: -248505.781326 EM: Round [52] log likelihood: -248505.773505 EM: Round [53] log likelihood: -248505.766056 EM: Round [54] log likelihood: -248505.758955 EM: Round [55] log likelihood: -248505.752178 EM: Round [56] log likelihood: -248505.745703 EM: Round [57] log likelihood: -248505.739512 EM: Round [58] log likelihood: -248505.733586 EM: Round [59] log likelihood: -248505.727910 EM: Round [60] log likelihood: -248505.722467 EM: Round [61] log likelihood: -248505.717244 EM: Round [62] log likelihood: -248505.712229 EM: Round [63] log likelihood: -248505.707409 EM: Round [64] log likelihood: -248505.702773 EM: Round [65] log likelihood: -248505.698311 EM: Round [66] log likelihood: -248505.694014 EM: Round [67] log likelihood: -248505.689873 EM: Round [68] log likelihood: -248505.685881 EM: Round [69] log likelihood: -248505.682028 EM: Round [70] log likelihood: -248505.678309 EM: Round [71] log likelihood: -248505.674718 EM: Round [72] log likelihood: -248505.671247 EM: Round [73] log likelihood: -248505.667891 EM: Round [74] log likelihood: -248505.664645 EM: Round [75] log likelihood: -248505.661504 EM: Round [76] log likelihood: -248505.658463 EM: Round [77] log likelihood: -248505.655518 EM: Round [78] log likelihood: -248505.652665 EM: Round [79] log likelihood: -248505.649900 EM: Round [80] log likelihood: -248505.647219 EM: Round [81] log likelihood: -248505.644619 EM: Round [82] log likelihood: -248505.642097 EM: Round [83] log likelihood: -248505.639649 EM: Round [84] log likelihood: -248505.637273 EM: Round [85] log likelihood: -248505.634966 EM: Round [86] log likelihood: -248505.632725 EM: Round [87] log likelihood: -248505.630548 EM: Round [88] log likelihood: -248505.628433 EM: Round [89] log likelihood: -248505.626377 EM: Round [90] log likelihood: -248505.624378 EM: Round [91] log likelihood: -248505.622435 EM: Round [92] log likelihood: -248505.620545 EM: Round [93] log likelihood: -248505.618707 EM: Round [94] log likelihood: -248505.616918 EM: Round [95] log likelihood: -248505.615178 EM: Round [96] log likelihood: -248505.613485 EM: Round [97] log likelihood: -248505.611836 EM: Round [98] log likelihood: -248505.610232 EM: Round [99] log likelihood: -248505.608669 EM: Round [100] log likelihood: -248505.607148 EM: Round [101] log likelihood: -248505.605666 EM: Round [102] log likelihood: -248505.604222 EM: Round [103] log likelihood: -248505.602816 EM: Round [104] log likelihood: -248505.601446 EM: Round [105] log likelihood: -248505.600112 EM: Round [106] log likelihood: -248505.598811 EM: Round [107] log likelihood: -248505.597543 EM: Round [108] log likelihood: -248505.596308 EM: Round [109] log likelihood: -248505.595103 EM: Round [110] log likelihood: -248505.593929 EM: Round [111] log likelihood: -248505.592784 EM: Round [112] log likelihood: -248505.591668 EM: Round [113] log likelihood: -248505.590579 EM: Round [114] log likelihood: -248505.589518 EM: Round [115] log likelihood: -248505.588483 EM: Round [116] log likelihood: -248505.587473 EM: Round [117] log likelihood: -248505.586488 EM: Round [118] log likelihood: -248505.585527 EM: Round [119] log likelihood: -248505.584589 EM: Round [120] log likelihood: -248505.583675 EM: Round [121] log likelihood: -248505.582783 EM: Round [122] log likelihood: -248505.581912 EM: Round [123] log likelihood: -248505.581062 EM: Round [124] log likelihood: -248505.580233 EM: Round [125] log likelihood: -248505.579424 EM: Round [126] log likelihood: -248505.578634 EM: Round [127] log likelihood: -248505.577863 EM: Round [128] log likelihood: -248505.577111 EM: Round [129] log likelihood: -248505.576376 EM: Round [130] log likelihood: -248505.575659 EM: Round [131] log likelihood: -248505.574959 EM: Round [132] log likelihood: -248505.574276 EM: Round [133] log likelihood: -248505.573609 EM: Round [134] log likelihood: -248505.572957 EM: Round [135] log likelihood: -248505.572321 EM: Round [136] log likelihood: -248505.571700 EM: Round [137] log likelihood: -248505.571094 EM: Round [138] log likelihood: -248505.570501 EM: Round [139] log likelihood: -248505.569923 EM: Round [140] log likelihood: -248505.569358 EM: Round [141] log likelihood: -248505.568806 EM: Round [142] log likelihood: -248505.568268 EM: Round [143] log likelihood: -248505.567741 EM: Round [144] log likelihood: -248505.567227 EM: Round [145] log likelihood: -248505.566725 EM: Round [146] log likelihood: -248505.566235 EM: Round [147] log likelihood: -248505.565756 EM: Round [148] log likelihood: -248505.565288 EM: Round [149] log likelihood: -248505.564830 EM: Round [150] log likelihood: -248505.564384 EM: Round [151] log likelihood: -248505.563947 EM: Round [152] log likelihood: -248505.563521 EM: Round [153] log likelihood: -248505.563104 EM: Round [154] log likelihood: -248505.562697 EM: Round [155] log likelihood: -248505.562300 EM: Round [156] log likelihood: -248505.561911 EM: Round [157] log likelihood: -248505.561532 EM: Round [158] log likelihood: -248505.561161 EM: Round [159] log likelihood: -248505.560798 EM: Round [160] log likelihood: -248505.560444 EM: Round [161] log likelihood: -248505.560098 EM: Round [162] log likelihood: -248505.559759 EM: Round [163] log likelihood: -248505.559429 EM: Round [164] log likelihood: -248505.559106 EM: Round [165] log likelihood: -248505.558790 EM: Round [166] log likelihood: -248505.558481 EM: Round [167] log likelihood: -248505.558180 EM: Round [168] log likelihood: -248505.557885 EM: Round [169] log likelihood: -248505.557597 EM: Round [170] log likelihood: -248505.557315 EM: Round [171] log likelihood: -248505.557040 EM: Round [172] log likelihood: -248505.556771 EM: Round [173] log likelihood: -248505.556508 EM: Round [174] log likelihood: -248505.556251 EM: Round [175] log likelihood: -248505.555999 EM: Round [176] log likelihood: -248505.555754 EM: Round [177] log likelihood: -248505.555514 EM: Round [178] log likelihood: -248505.555279 EM: Round [179] log likelihood: -248505.555049 EM: Round [180] log likelihood: -248505.554825 EM: Round [181] log likelihood: -248505.554606 EM: Round [182] log likelihood: -248505.554392 EM: Round [183] log likelihood: -248505.554182 EM: Round [184] log likelihood: -248505.553977 EM: Round [185] log likelihood: -248505.553777 EM: Round [186] log likelihood: -248505.553581 EM: Round [187] log likelihood: -248505.553390 EM: Round [188] log likelihood: -248505.553202 EM: Round [189] log likelihood: -248505.553019 EM: Round [190] log likelihood: -248505.552840 EM: Round [191] log likelihood: -248505.552665 EM: Round [192] log likelihood: -248505.552494 EM: Round [193] log likelihood: -248505.552327 EM: Round [194] log likelihood: -248505.552164 EM: Round [195] log likelihood: -248505.552004 EM: Round [196] log likelihood: -248505.551847 EM: Round [197] log likelihood: -248505.551695 EM: Round [198] log likelihood: -248505.551545 EM: Round [199] log likelihood: -248505.551399 EM: Round [200] log likelihood: -248505.551256 EM: Round [201] log likelihood: -248505.551116 EM: Round [202] log likelihood: -248505.550980 EM: Round [203] log likelihood: -248505.550846 EM: Round [204] log likelihood: -248505.550715 EM: Round [205] log likelihood: -248505.550588 EM: Round [206] log likelihood: -248505.550463 EM: Round [207] log likelihood: -248505.550340 EM: Round [208] log likelihood: -248505.550221 EM: Round [209] log likelihood: -248505.550104 EM: Round [210] log likelihood: -248505.549990 EM: Round [211] log likelihood: -248505.549878 EM: Round [212] log likelihood: -248505.549769 EM: Round [213] log likelihood: -248505.549662 EM: Round [214] log likelihood: -248505.549557 EM: Round [215] log likelihood: -248505.549455 EM: Round [216] log likelihood: -248505.549355 EM: Stopping iterations at round 216 due to insufficient improvement in likelihood. EM: Starting log likelihood: -248520.710980 EM: Round [1] log likelihood: -248382.205210 EM: Round [2] log likelihood: -248329.868530 EM: Round [3] log likelihood: -248305.401993 EM: Round [4] log likelihood: -248292.851802 EM: Round [5] log likelihood: -248286.088657 EM: Round [6] log likelihood: -248282.299966 EM: Round [7] log likelihood: -248280.091810 EM: Round [8] log likelihood: -248278.749017 EM: Round [9] log likelihood: -248277.895512 EM: Round [10] log likelihood: -248277.328466 EM: Round [11] log likelihood: -248276.935375 EM: Round [12] log likelihood: -248276.651910 EM: Round [13] log likelihood: -248276.440094 EM: Round [14] log likelihood: -248276.276766 EM: Round [15] log likelihood: -248276.147335 EM: Round [16] log likelihood: -248276.042324 EM: Round [17] log likelihood: -248275.955389 EM: Round [18] log likelihood: -248275.882169 EM: Round [19] log likelihood: -248275.819587 EM: Round [20] log likelihood: -248275.765423 EM: Round [21] log likelihood: -248275.718038 EM: Round [22] log likelihood: -248275.676202 EM: Round [23] log likelihood: -248275.638970 EM: Round [24] log likelihood: -248275.605608 EM: Round [25] log likelihood: -248275.575533 EM: Round [26] log likelihood: -248275.548279 EM: Round [27] log likelihood: -248275.523466 EM: Round [28] log likelihood: -248275.500780 EM: Round [29] log likelihood: -248275.479960 EM: Round [30] log likelihood: -248275.460789 EM: Round [31] log likelihood: -248275.443079 EM: Round [32] log likelihood: -248275.426671 EM: Round [33] log likelihood: -248275.411428 EM: Round [34] log likelihood: -248275.397232 EM: Round [35] log likelihood: -248275.383979 EM: Round [36] log likelihood: -248275.371578 EM: Round [37] log likelihood: -248275.359949 EM: Round [38] log likelihood: -248275.349022 EM: Round [39] log likelihood: -248275.338734 EM: Round [40] log likelihood: -248275.329030 EM: Round [41] log likelihood: -248275.319860 EM: Round [42] log likelihood: -248275.311181 EM: Round [43] log likelihood: -248275.302951 EM: Round [44] log likelihood: -248275.295136 EM: Round [45] log likelihood: -248275.287704 EM: Round [46] log likelihood: -248275.280625 EM: Round [47] log likelihood: -248275.273874 EM: Round [48] log likelihood: -248275.267427 EM: Round [49] log likelihood: -248275.261262 EM: Round [50] log likelihood: -248275.255361 EM: Round [51] log likelihood: -248275.249705 EM: Round [52] log likelihood: -248275.244278 EM: Round [53] log likelihood: -248275.239066 EM: Round [54] log likelihood: -248275.234055 EM: Round [55] log likelihood: -248275.229233 EM: Round [56] log likelihood: -248275.224589 EM: Round [57] log likelihood: -248275.220113 EM: Round [58] log likelihood: -248275.215794 EM: Round [59] log likelihood: -248275.211625 EM: Round [60] log likelihood: -248275.207598 EM: Round [61] log likelihood: -248275.203704 EM: Round [62] log likelihood: -248275.199938 EM: Round [63] log likelihood: -248275.196292 EM: Round [64] log likelihood: -248275.192762 EM: Round [65] log likelihood: -248275.189341 EM: Round [66] log likelihood: -248275.186024 EM: Round [67] log likelihood: -248275.182808 EM: Round [68] log likelihood: -248275.179687 EM: Round [69] log likelihood: -248275.176657 EM: Round [70] log likelihood: -248275.173715 EM: Round [71] log likelihood: -248275.170857 EM: Round [72] log likelihood: -248275.168079 EM: Round [73] log likelihood: -248275.165379 EM: Round [74] log likelihood: -248275.162753 EM: Round [75] log likelihood: -248275.160199 EM: Round [76] log likelihood: -248275.157714 EM: Round [77] log likelihood: -248275.155296 EM: Round [78] log likelihood: -248275.152942 EM: Round [79] log likelihood: -248275.150650 EM: Round [80] log likelihood: -248275.148418 EM: Round [81] log likelihood: -248275.146244 EM: Round [82] log likelihood: -248275.144126 EM: Round [83] log likelihood: -248275.142062 EM: Round [84] log likelihood: -248275.140051 EM: Round [85] log likelihood: -248275.138090 EM: Round [86] log likelihood: -248275.136179 EM: Round [87] log likelihood: -248275.134316 EM: Round [88] log likelihood: -248275.132498 EM: Round [89] log likelihood: -248275.130726 EM: Round [90] log likelihood: -248275.128997 EM: Round [91] log likelihood: -248275.127311 EM: Round [92] log likelihood: -248275.125666 EM: Round [93] log likelihood: -248275.124061 EM: Round [94] log likelihood: -248275.122495 EM: Round [95] log likelihood: -248275.120966 EM: Round [96] log likelihood: -248275.119475 EM: Round [97] log likelihood: -248275.118019 EM: Round [98] log likelihood: -248275.116598 EM: Round [99] log likelihood: -248275.115210 EM: Round [100] log likelihood: -248275.113856 EM: Round [101] log likelihood: -248275.112534 EM: Round [102] log likelihood: -248275.111242 EM: Round [103] log likelihood: -248275.109982 EM: Round [104] log likelihood: -248275.108751 EM: Round [105] log likelihood: -248275.107549 EM: Round [106] log likelihood: -248275.106374 EM: Round [107] log likelihood: -248275.105228 EM: Round [108] log likelihood: -248275.104108 EM: Round [109] log likelihood: -248275.103014 EM: Round [110] log likelihood: -248275.101945 EM: Round [111] log likelihood: -248275.100901 EM: Round [112] log likelihood: -248275.099882 EM: Round [113] log likelihood: -248275.098886 EM: Round [114] log likelihood: -248275.097912 EM: Round [115] log likelihood: -248275.096962 EM: Round [116] log likelihood: -248275.096033 EM: Round [117] log likelihood: -248275.095125 EM: Round [118] log likelihood: -248275.094238 EM: Round [119] log likelihood: -248275.093371 EM: Round [120] log likelihood: -248275.092525 EM: Round [121] log likelihood: -248275.091697 EM: Round [122] log likelihood: -248275.090888 EM: Round [123] log likelihood: -248275.090098 EM: Round [124] log likelihood: -248275.089326 EM: Round [125] log likelihood: -248275.088571 EM: Round [126] log likelihood: -248275.087834 EM: Round [127] log likelihood: -248275.087113 EM: Round [128] log likelihood: -248275.086408 EM: Round [129] log likelihood: -248275.085719 EM: Round [130] log likelihood: -248275.085046 EM: Round [131] log likelihood: -248275.084388 EM: Round [132] log likelihood: -248275.083745 EM: Round [133] log likelihood: -248275.083117 EM: Round [134] log likelihood: -248275.082502 EM: Round [135] log likelihood: -248275.081902 EM: Round [136] log likelihood: -248275.081314 EM: Round [137] log likelihood: -248275.080740 EM: Round [138] log likelihood: -248275.080179 EM: Round [139] log likelihood: -248275.079631 EM: Round [140] log likelihood: -248275.079095 EM: Round [141] log likelihood: -248275.078570 EM: Round [142] log likelihood: -248275.078058 EM: Round [143] log likelihood: -248275.077557 EM: Round [144] log likelihood: -248275.077067 EM: Round [145] log likelihood: -248275.076588 EM: Round [146] log likelihood: -248275.076120 EM: Round [147] log likelihood: -248275.075662 EM: Round [148] log likelihood: -248275.075214 EM: Round [149] log likelihood: -248275.074777 EM: Round [150] log likelihood: -248275.074349 EM: Round [151] log likelihood: -248275.073931 EM: Round [152] log likelihood: -248275.073522 EM: Round [153] log likelihood: -248275.073122 EM: Round [154] log likelihood: -248275.072731 EM: Round [155] log likelihood: -248275.072348 EM: Round [156] log likelihood: -248275.071974 EM: Round [157] log likelihood: -248275.071609 EM: Round [158] log likelihood: -248275.071251 EM: Round [159] log likelihood: -248275.070901 EM: Round [160] log likelihood: -248275.070560 EM: Round [161] log likelihood: -248275.070225 EM: Round [162] log likelihood: -248275.069898 EM: Round [163] log likelihood: -248275.069579 EM: Round [164] log likelihood: -248275.069266 EM: Round [165] log likelihood: -248275.068960 EM: Round [166] log likelihood: -248275.068661 EM: Round [167] log likelihood: -248275.068369 EM: Round [168] log likelihood: -248275.068083 EM: Round [169] log likelihood: -248275.067804 EM: Round [170] log likelihood: -248275.067530 EM: Round [171] log likelihood: -248275.067263 EM: Round [172] log likelihood: -248275.067001 EM: Round [173] log likelihood: -248275.066746 EM: Round [174] log likelihood: -248275.066495 EM: Round [175] log likelihood: -248275.066251 EM: Round [176] log likelihood: -248275.066012 EM: Round [177] log likelihood: -248275.065778 EM: Round [178] log likelihood: -248275.065549 EM: Round [179] log likelihood: -248275.065325 EM: Round [180] log likelihood: -248275.065106 EM: Round [181] log likelihood: -248275.064892 EM: Round [182] log likelihood: -248275.064683 EM: Round [183] log likelihood: -248275.064478 EM: Round [184] log likelihood: -248275.064278 EM: Round [185] log likelihood: -248275.064082 EM: Round [186] log likelihood: -248275.063890 EM: Round [187] log likelihood: -248275.063703 EM: Round [188] log likelihood: -248275.063520 EM: Round [189] log likelihood: -248275.063340 EM: Round [190] log likelihood: -248275.063165 EM: Round [191] log likelihood: -248275.062994 EM: Round [192] log likelihood: -248275.062826 EM: Round [193] log likelihood: -248275.062662 EM: Round [194] log likelihood: -248275.062502 EM: Round [195] log likelihood: -248275.062345 EM: Round [196] log likelihood: -248275.062191 EM: Round [197] log likelihood: -248275.062041 EM: Round [198] log likelihood: -248275.061894 EM: Round [199] log likelihood: -248275.061751 EM: Round [200] log likelihood: -248275.061610 EM: Round [201] log likelihood: -248275.061473 EM: Round [202] log likelihood: -248275.061338 EM: Round [203] log likelihood: -248275.061207 EM: Round [204] log likelihood: -248275.061078 EM: Round [205] log likelihood: -248275.060952 EM: Round [206] log likelihood: -248275.060829 EM: Round [207] log likelihood: -248275.060709 EM: Round [208] log likelihood: -248275.060591 EM: Round [209] log likelihood: -248275.060476 EM: Round [210] log likelihood: -248275.060363 EM: Round [211] log likelihood: -248275.060253 EM: Round [212] log likelihood: -248275.060145 EM: Round [213] log likelihood: -248275.060040 EM: Round [214] log likelihood: -248275.059937 EM: Round [215] log likelihood: -248275.059836 EM: Round [216] log likelihood: -248275.059737 EM: Stopping iterations at round 216 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 154820398 > /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir > /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir --annotate /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir -done, see /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1618, filtered: 11321) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.BecFL8UWlB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.BecFL8UWlB/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000278975.1] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000286787.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000234825.3] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000233448.2] WARNING, no entry stored in dbm for [ENSG00000213771.3] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000231322.5] WARNING, no entry stored in dbm for [ENSG00000241350.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000276735.1] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000234962.6] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000230630.5] WARNING, no entry stored in dbm for [ENSG00000271147.8] WARNING, no entry stored in dbm for [ENSG00000260071.2] WARNING, no entry stored in dbm for [ENSG00000284740.1] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000287356.1] WARNING, no entry stored in dbm for [ENSG00000267727.1] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000220685.3] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000268081.1] WARNING, no entry stored in dbm for [ENSG00000261501.1] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000226532.1] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000225264.3] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000287985.1] WARNING, no entry stored in dbm for [ENSG00000228303.1] WARNING, no entry stored in dbm for [ENSG00000237438.7] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000276715.4] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000257815.7] WARNING, no entry stored in dbm for [ENSG00000285848.1] WARNING, no entry stored in dbm for [ENSG00000248334.6] WARNING, no entry stored in dbm for [ENSG00000232977.7] WARNING, no entry stored in dbm for [ENSG00000228775.8] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000215403.1] WARNING, no entry stored in dbm for [ENSG00000250961.2] WARNING, no entry stored in dbm for [ENSG00000246877.1] WARNING, no entry stored in dbm for [ENSG00000271993.1] WARNING, no entry stored in dbm for [ENSG00000188599.17] WARNING, no entry stored in dbm for [ENSG00000131002.12] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000182888.5] WARNING, no entry stored in dbm for [ENSG00000176912.5] WARNING, no entry stored in dbm for [ENSG00000287306.1] WARNING, no entry stored in dbm for [ENSG00000270641.1] WARNING, no entry stored in dbm for [ENSG00000270641.1] WARNING, no entry stored in dbm for [ENSG00000242759.8] WARNING, no entry stored in dbm for [ENSG00000283480.1] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000232600.3] WARNING, no entry stored in dbm for [ENSG00000196204.12] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000223088.1] WARNING, no entry stored in dbm for [ENSG00000287428.1] WARNING, no entry stored in dbm for [ENSG00000272168.8] WARNING, no entry stored in dbm for [ENSG00000188681.11] WARNING, no entry stored in dbm for [ENSG00000268318.5] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000266489.3] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000228976.1] WARNING, no entry stored in dbm for [ENSG00000255178.1] WARNING, no entry stored in dbm for [ENSG00000277072.5] WARNING, no entry stored in dbm for [ENSG00000233622.3] WARNING, no entry stored in dbm for [ENSG00000231535.7] WARNING, no entry stored in dbm for [ENSG00000221879.3] WARNING, no entry stored in dbm for [ENSG00000224543.4] WARNING, no entry stored in dbm for [ENSG00000236577.1] WARNING, no entry stored in dbm for [ENSG00000267384.3] WARNING, no entry stored in dbm for [ENSG00000233705.7] WARNING, no entry stored in dbm for [ENSG00000231584.8] WARNING, no entry stored in dbm for [ENSG00000244265.2] WARNING, no entry stored in dbm for [ENSG00000251588.2] WARNING, no entry stored in dbm for [ENSG00000258545.6] WARNING, no entry stored in dbm for [ENSG00000287364.1] WARNING, no entry stored in dbm for [ENSG00000216687.2] WARNING, no entry stored in dbm for [ENSG00000267663.1] WARNING, no entry stored in dbm for [ENSG00000246889.2] WARNING, no entry stored in dbm for [ENSG00000285563.1] WARNING, no entry stored in dbm for [ENSG00000219253.1] WARNING, no entry stored in dbm for [ENSG00000231541.1] WARNING, no entry stored in dbm for [ENSG00000184669.9] WARNING, no entry stored in dbm for [ENSG00000229638.1] WARNING, no entry stored in dbm for [ENSG00000224683.1] WARNING, no entry stored in dbm for [ENSG00000231409.3] WARNING, no entry stored in dbm for [ENSG00000228664.1] WARNING, no entry stored in dbm for [ENSG00000234524.1] WARNING, no entry stored in dbm for [ENSG00000229824.1] WARNING, no entry stored in dbm for [ENSG00000199849.1] WARNING, no entry stored in dbm for [ENSG00000261325.1] WARNING, no entry stored in dbm for [ENSG00000241665.3] WARNING, no entry stored in dbm for [ENSG00000265735.2] WARNING, no entry stored in dbm for [ENSG00000241665.3] WARNING, no entry stored in dbm for [ENSG00000263740.2] WARNING, no entry stored in dbm for [ENSG00000241665.3] WARNING, no entry stored in dbm for [ENSG00000244642.3] WARNING, no entry stored in dbm for [ENSG00000241665.3] WARNING, no entry stored in dbm for [ENSG00000276168.1] WARNING, no entry stored in dbm for [ENSG00000241665.3] WARNING, no entry stored in dbm for [ENSG00000282885.2] WARNING, no entry stored in dbm for [ENSG00000244056.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000201428.1] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000258384.1] WARNING, no entry stored in dbm for [ENSG00000227751.1] WARNING, no entry stored in dbm for [ENSG00000278147.1] WARNING, no entry stored in dbm for [ENSG00000258342.2] WARNING, no entry stored in dbm for [ENSG00000226625.1] WARNING, no entry stored in dbm for [ENSG00000287011.1] WARNING, no entry stored in dbm for [ENSG00000233290.3] WARNING, no entry stored in dbm for [ENSG00000269386.5] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000248215.6] WARNING, no entry stored in dbm for [ENSG00000281128.2] WARNING, no entry stored in dbm for [ENSG00000234473.1] WARNING, no entry stored in dbm for [ENSG00000282961.1] WARNING, no entry stored in dbm for [ENSG00000279833.1] WARNING, no entry stored in dbm for [ENSG00000230607.3] WARNING, no entry stored in dbm for [ENSG00000272556.2] WARNING, no entry stored in dbm for [ENSG00000253266.1] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000204790.9] WARNING, no entry stored in dbm for [ENSG00000254777.5] WARNING, no entry stored in dbm for [ENSG00000254783.1] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000238197.6] WARNING, no entry stored in dbm for [ENSG00000288063.1] WARNING, no entry stored in dbm for [ENSG00000258260.1] WARNING, no entry stored in dbm for [ENSG00000248550.4] WARNING, no entry stored in dbm for [ENSG00000214188.9] WARNING, no entry stored in dbm for [ENSG00000255355.1] WARNING, no entry stored in dbm for [ENSG00000257838.5] WARNING, no entry stored in dbm for [ENSG00000257639.1] WARNING, no entry stored in dbm for [ENSG00000268120.1] WARNING, no entry stored in dbm for [ENSG00000223482.8] WARNING, no entry stored in dbm for [ENSG00000274602.5] WARNING, no entry stored in dbm for [ENSG00000253557.6] WARNING, no entry stored in dbm for [ENSG00000258101.2] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000244332.1] WARNING, no entry stored in dbm for [ENSG00000260549.2] WARNING, no entry stored in dbm for [ENSG00000272288.6] WARNING, no entry stored in dbm for [ENSG00000242242.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000223559.1] WARNING, no entry stored in dbm for [ENSG00000249448.1] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000220785.7] WARNING, no entry stored in dbm for [ENSG00000228782.7] WARNING, no entry stored in dbm for [ENSG00000286319.1] WARNING, no entry stored in dbm for [ENSG00000224430.2] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000224616.3] WARNING, no entry stored in dbm for [ENSG00000260167.1] WARNING, no entry stored in dbm for [ENSG00000197558.13] WARNING, no entry stored in dbm for [ENSG00000237463.6] WARNING, no entry stored in dbm for [ENSG00000197258.5] WARNING, no entry stored in dbm for [ENSG00000213071.11] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000248494.1] WARNING, no entry stored in dbm for [ENSG00000234546.4] WARNING, no entry stored in dbm for [ENSG00000231131.8] WARNING, no entry stored in dbm for [ENSG00000234476.3] WARNING, no entry stored in dbm for [ENSG00000260239.2] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000251273.4] WARNING, no entry stored in dbm for [ENSG00000232190.3] WARNING, no entry stored in dbm for [ENSG00000242781.2] WARNING, no entry stored in dbm for [ENSG00000218227.3] WARNING, no entry stored in dbm for [ENSG00000234663.7] WARNING, no entry stored in dbm for [ENSG00000180279.7] WARNING, no entry stored in dbm for [ENSG00000249487.7] WARNING, no entry stored in dbm for [ENSG00000234323.8] WARNING, no entry stored in dbm for [ENSG00000225434.3] WARNING, no entry stored in dbm for [ENSG00000237491.10] WARNING, no entry stored in dbm for [ENSG00000247157.7] WARNING, no entry stored in dbm for [ENSG00000280734.3] WARNING, no entry stored in dbm for [ENSG00000228794.10] WARNING, no entry stored in dbm for [ENSG00000224577.3] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000235314.1] WARNING, no entry stored in dbm for [ENSG00000198886.2] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000262619.2] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000286217.2] WARNING, no entry stored in dbm for [ENSG00000225880.5] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000243406.6] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000287275.1] WARNING, no entry stored in dbm for [ENSG00000287581.1] WARNING, no entry stored in dbm for [ENSG00000255815.3] WARNING, no entry stored in dbm for [ENSG00000233652.1] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000233308.2] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000277946.1] WARNING, no entry stored in dbm for [ENSG00000268287.1] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000239665.8] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000271585.1] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000235821.1] WARNING, no entry stored in dbm for [ENSG00000258676.5] WARNING, no entry stored in dbm for [ENSG00000237424.1] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000248610.1] WARNING, no entry stored in dbm for [ENSG00000261863.1] WARNING, no entry stored in dbm for [ENSG00000240990.10] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000248738.6] WARNING, no entry stored in dbm for [ENSG00000232605.2] WARNING, no entry stored in dbm for [ENSG00000233299.1] WARNING, no entry stored in dbm for [ENSG00000279066.1] WARNING, no entry stored in dbm for [ENSG00000259426.6] WARNING, no entry stored in dbm for [ENSG00000274471.2] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000228223.3] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000227038.3] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000254499.1] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000255189.1] WARNING, no entry stored in dbm for [ENSG00000215190.9] WARNING, no entry stored in dbm for [ENSG00000250959.2] WARNING, no entry stored in dbm for [ENSG00000272396.1] WARNING, no entry stored in dbm for [ENSG00000224795.3] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000236991.6] WARNING, no entry stored in dbm for [ENSG00000237264.4] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000250049.7] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000266998.1] WARNING, no entry stored in dbm for [ENSG00000214776.12] WARNING, no entry stored in dbm for [ENSG00000279459.1] WARNING, no entry stored in dbm for [ENSG00000224032.7] WARNING, no entry stored in dbm for [ENSG00000204623.9] WARNING, no entry stored in dbm for [ENSG00000275800.1] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000263883.1] WARNING, no entry stored in dbm for [ENSG00000278862.1] WARNING, no entry stored in dbm for [ENSG00000243701.7] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000264743.2] WARNING, no entry stored in dbm for [ENSG00000250768.1] WARNING, no entry stored in dbm for [ENSG00000218227.3] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000233652.1] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000282164.3] WARNING, no entry stored in dbm for [ENSG00000236948.2] WARNING, no entry stored in dbm for [ENSG00000273214.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000279584.1] WARNING, no entry stored in dbm for [ENSG00000248551.1] WARNING, no entry stored in dbm for [ENSG00000271270.7] WARNING, no entry stored in dbm for [ENSG00000270533.2] WARNING, no entry stored in dbm for [ENSG00000278932.4] WARNING, no entry stored in dbm for [ENSG00000230665.3] WARNING, no entry stored in dbm for [ENSG00000230630.5] WARNING, no entry stored in dbm for [ENSG00000236360.2] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000251339.6] WARNING, no entry stored in dbm for [ENSG00000254872.3] WARNING, no entry stored in dbm for [ENSG00000260750.7] WARNING, no entry stored in dbm for [ENSG00000269904.2] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000228251.1] WARNING, no entry stored in dbm for [ENSG00000286687.1] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000225718.2] WARNING, no entry stored in dbm for [ENSG00000174365.20] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000261376.1] WARNING, no entry stored in dbm for [ENSG00000257563.1] WARNING, no entry stored in dbm for [ENSG00000269950.1] WARNING, no entry stored in dbm for [ENSG00000179428.2] WARNING, no entry stored in dbm for [ENSG00000235510.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000254765.1] WARNING, no entry stored in dbm for [ENSG00000244009.1] WARNING, no entry stored in dbm for [ENSG00000284634.1] WARNING, no entry stored in dbm for [ENSG00000229847.9] WARNING, no entry stored in dbm for [ENSG00000214293.9] WARNING, no entry stored in dbm for [ENSG00000253553.7] WARNING, no entry stored in dbm for [ENSG00000277693.2] WARNING, no entry stored in dbm for [ENSG00000254459.1] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000288061.1] WARNING, no entry stored in dbm for [ENSG00000228239.1] WARNING, no entry stored in dbm for [ENSG00000277878.1] WARNING, no entry stored in dbm for [ENSG00000272556.2] WARNING, no entry stored in dbm for [ENSG00000275465.7] WARNING, no entry stored in dbm for [ENSG00000251250.3] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000232576.2] WARNING, no entry stored in dbm for [ENSG00000272512.1] WARNING, no entry stored in dbm for [ENSG00000272512.1] WARNING, no entry stored in dbm for [ENSG00000272512.1] WARNING, no entry stored in dbm for [ENSG00000229953.1] WARNING, no entry stored in dbm for [ENSG00000238260.1] WARNING, no entry stored in dbm for [ENSG00000240291.1] WARNING, no entry stored in dbm for [ENSG00000287887.1] WARNING, no entry stored in dbm for [ENSG00000279459.1] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000232347.1] WARNING, no entry stored in dbm for [ENSG00000237445.2] WARNING, no entry stored in dbm for [ENSG00000236523.2] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000270066.3] WARNING, no entry stored in dbm for [ENSG00000203620.2] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000215198.3] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000273523.1] WARNING, no entry stored in dbm for [ENSG00000287513.1] WARNING, no entry stored in dbm for [ENSG00000229605.5] WARNING, no entry stored in dbm for [ENSG00000259083.1] WARNING, no entry stored in dbm for [ENSG00000230922.1] WARNING, no entry stored in dbm for [ENSG00000232310.8] WARNING, no entry stored in dbm for [ENSG00000261116.1] WARNING, no entry stored in dbm for [ENSG00000279175.1] WARNING, no entry stored in dbm for [ENSG00000287619.1] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000280114.1] WARNING, no entry stored in dbm for [ENSG00000285909.1] WARNING, no entry stored in dbm for [ENSG00000248692.5] WARNING, no entry stored in dbm for [ENSG00000258730.1] WARNING, no entry stored in dbm for [ENSG00000261684.2] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000237017.1] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000251002.8] WARNING, no entry stored in dbm for [ENSG00000261505.1] WARNING, no entry stored in dbm for [ENSG00000223999.1] WARNING, no entry stored in dbm for [ENSG00000237550.5] WARNING, no entry stored in dbm for [ENSG00000281741.2] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000249942.1] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000253181.2] WARNING, no entry stored in dbm for [ENSG00000265298.1] WARNING, no entry stored in dbm for [ENSG00000202537.1] WARNING, no entry stored in dbm for [ENSG00000265298.1] WARNING, no entry stored in dbm for [ENSG00000263427.1] WARNING, no entry stored in dbm for [ENSG00000262662.1] WARNING, no entry stored in dbm for [ENSG00000258232.2] WARNING, no entry stored in dbm for [ENSG00000278791.1] WARNING, no entry stored in dbm for [ENSG00000279460.1] WARNING, no entry stored in dbm for [ENSG00000244513.7] WARNING, no entry stored in dbm for [ENSG00000260776.6] WARNING, no entry stored in dbm for [ENSG00000240036.4] WARNING, no entry stored in dbm for [ENSG00000234735.1] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000256343.8] WARNING, no entry stored in dbm for [ENSG00000286133.2] WARNING, no entry stored in dbm for [ENSG00000242622.2] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000227542.1] WARNING, no entry stored in dbm for [ENSG00000205018.2] WARNING, no entry stored in dbm for [ENSG00000232760.1] WARNING, no entry stored in dbm for [ENSG00000267053.8] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000262580.5] WARNING, no entry stored in dbm for [ENSG00000227617.9] WARNING, no entry stored in dbm for [ENSG00000257225.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000240458.1] WARNING, no entry stored in dbm for [ENSG00000255229.1] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000253200.1] WARNING, no entry stored in dbm for [ENSG00000253200.1] WARNING, no entry stored in dbm for [ENSG00000260894.1] WARNING, no entry stored in dbm for [ENSG00000286388.1] WARNING, no entry stored in dbm for [ENSG00000215263.2] WARNING, no entry stored in dbm for [ENSG00000240674.1] WARNING, no entry stored in dbm for [ENSG00000260413.1] WARNING, no entry stored in dbm for [ENSG00000260413.1] WARNING, no entry stored in dbm for [ENSG00000257199.2] WARNING, no entry stored in dbm for [ENSG00000259595.1] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000240669.1] WARNING, no entry stored in dbm for [ENSG00000255750.6] WARNING, no entry stored in dbm for [ENSG00000259407.1] WARNING, no entry stored in dbm for [ENSG00000267466.1] WARNING, no entry stored in dbm for [ENSG00000230551.4] WARNING, no entry stored in dbm for [ENSG00000234537.1] WARNING, no entry stored in dbm for [ENSG00000272551.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000274184.1] WARNING, no entry stored in dbm for [ENSG00000260599.1] WARNING, no entry stored in dbm for [ENSG00000225840.2] WARNING, no entry stored in dbm for [ENSG00000283695.1] WARNING, no entry stored in dbm for [ENSG00000259663.2] WARNING, no entry stored in dbm for [ENSG00000270804.1] WARNING, no entry stored in dbm for [ENSG00000229458.2] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000203472.3] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000284671.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000251387.1] WARNING, no entry stored in dbm for [ENSG00000262420.3] WARNING, no entry stored in dbm for [ENSG00000274328.1] WARNING, no entry stored in dbm for [ENSG00000259962.1] WARNING, no entry stored in dbm for [ENSG00000274758.1] WARNING, no entry stored in dbm for [ENSG00000230785.2] WARNING, no entry stored in dbm for [ENSG00000287778.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000279853.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000287011.1] WARNING, no entry stored in dbm for [ENSG00000231185.7] WARNING, no entry stored in dbm for [ENSG00000237840.6] * STAR-Fusion complete. See output: /tmp/nxf.BecFL8UWlB/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)