Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/612d79df872e8896f7b6244d911392/tih_rna_sample_00643_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/5ffd4d0b761b29861b34d430092dd2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/5ffd4d0b761b29861b34d430092dd2/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory