.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (tih_rna_sample_00723_B23MVV7LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/a3ae5586f1aeaa7809a3457235c6ac/.command.err
Size: 48.4 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (tih_rna_sample_00723_B23MVV7LT4_1)
Attempt
Content

-ctat genome lib [/tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.OIvcXR9nwJ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary
-sample contains 45595088 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir  -J /tmp/nxf.OIvcXR9nwJ/tih_rna_sample_00723_B23MVV7LT4_1.Chimeric.out.junction  -O /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.OIvcXR9nwJ/tih_rna_sample_00723_B23MVV7LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[1240000], rate=64304.24/min -building interval tree based on /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[1240000], rate=63644.14/min -building interval tree based on /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[1240000], rate=56363.64/min -building interval tree based on /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[1250000], rate=52779.73/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4285714.29 reads per min processed...  
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 4200000.00 reads per min processed...  
 4363636.36 reads per min processed...  
 4153846.15 reads per min processed...  
 4285714.29 reads per min processed...  
 4125000.00 reads per min processed...  
 4235294.12 reads per min processed...  
 4105263.16 reads per min processed...  
 4200000.00 reads per min processed...  
 4090909.09 reads per min processed...  
 4173913.04 reads per min processed...  
 4080000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 4071428.57 reads per min processed...  
 4000000.00 reads per min processed...  
 4064516.13 reads per min processed...  
 4125000.00 reads per min processed...  
 4058823.53 reads per min processed...  
 4114285.71 reads per min processed...  
 4054054.05 reads per min processed...  
 4105263.16 reads per min processed...  
 4050000.00 reads per min processed...  
 4200000.00 reads per min processed...  
 4243902.44 reads per min processed...  
 4285714.29 reads per min processed...  
 4227272.73 reads per min processed...  
 4266666.67 reads per min processed...  
 4212765.96 reads per min processed...  
 4250000.00 reads per min processed...  
 4200000.00 reads per min processed...  
 4235294.12 reads per min processed...  
 4269230.77 reads per min processed...  
 4222222.22 reads per min processed...  
 4178571.43 reads per min processed...  
 4210526.32 reads per min processed...  
 4241379.31 reads per min processed...  
 4200000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.OIvcXR9nwJ/tih_rna_sample_00723_B23MVV7LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -156138.605978
EM: Round [1] log likelihood: -155999.998267
EM: Round [2] log likelihood: -155949.701944
EM: Round [3] log likelihood: -155927.081033
EM: Round [4] log likelihood: -155915.700055
EM: Round [5] log likelihood: -155909.541776
EM: Round [6] log likelihood: -155906.009382
EM: Round [7] log likelihood: -155903.873959
EM: Round [8] log likelihood: -155902.519125
EM: Round [9] log likelihood: -155901.621193
EM: Round [10] log likelihood: -155901.002801
EM: Round [11] log likelihood: -155900.562660
EM: Round [12] log likelihood: -155900.240545
EM: Round [13] log likelihood: -155899.999234
EM: Round [14] log likelihood: -155899.814872
EM: Round [15] log likelihood: -155899.671658
EM: Round [16] log likelihood: -155899.558811
EM: Round [17] log likelihood: -155899.468782
EM: Round [18] log likelihood: -155899.396167
EM: Round [19] log likelihood: -155899.337023
EM: Round [20] log likelihood: -155899.288424
EM: Round [21] log likelihood: -155899.248169
EM: Round [22] log likelihood: -155899.214578
EM: Round [23] log likelihood: -155899.186360
EM: Round [24] log likelihood: -155899.162506
EM: Round [25] log likelihood: -155899.142225
EM: Round [26] log likelihood: -155899.124889
EM: Round [27] log likelihood: -155899.109997
EM: Round [28] log likelihood: -155899.097145
EM: Round [29] log likelihood: -155899.086005
EM: Round [30] log likelihood: -155899.076309
EM: Round [31] log likelihood: -155899.067839
EM: Round [32] log likelihood: -155899.060413
EM: Round [33] log likelihood: -155899.053880
EM: Round [34] log likelihood: -155899.048114
EM: Round [35] log likelihood: -155899.043009
EM: Round [36] log likelihood: -155899.038477
EM: Round [37] log likelihood: -155899.034441
EM: Round [38] log likelihood: -155899.030839
EM: Round [39] log likelihood: -155899.027614
EM: Round [40] log likelihood: -155899.024721
EM: Round [41] log likelihood: -155899.022119
EM: Round [42] log likelihood: -155899.019772
EM: Round [43] log likelihood: -155899.017652
EM: Round [44] log likelihood: -155899.015731
EM: Round [45] log likelihood: -155899.013988
EM: Round [46] log likelihood: -155899.012403
EM: Round [47] log likelihood: -155899.010957
EM: Round [48] log likelihood: -155899.009637
EM: Round [49] log likelihood: -155899.008428
EM: Round [50] log likelihood: -155899.007319
EM: Round [51] log likelihood: -155899.006300
EM: Round [52] log likelihood: -155899.005362
EM: Round [53] log likelihood: -155899.004496
EM: Round [54] log likelihood: -155899.003696
EM: Round [55] log likelihood: -155899.002955
EM: Round [56] log likelihood: -155899.002267
EM: Round [57] log likelihood: -155899.001628
EM: Round [58] log likelihood: -155899.001032
EM: Round [59] log likelihood: -155899.000476
EM: Round [60] log likelihood: -155898.999957
EM: Round [61] log likelihood: -155898.999471
EM: Round [62] log likelihood: -155898.999014
EM: Round [63] log likelihood: -155898.998586
EM: Round [64] log likelihood: -155898.998183
EM: Round [65] log likelihood: -155898.997802
EM: Round [66] log likelihood: -155898.997444
EM: Round [67] log likelihood: -155898.997104
EM: Round [68] log likelihood: -155898.996783
EM: Round [69] log likelihood: -155898.996478
EM: Round [70] log likelihood: -155898.996189
EM: Round [71] log likelihood: -155898.995913
EM: Round [72] log likelihood: -155898.995651
EM: Round [73] log likelihood: -155898.995401
EM: Round [74] log likelihood: -155898.995163
EM: Round [75] log likelihood: -155898.994934
EM: Round [76] log likelihood: -155898.994716
EM: Round [77] log likelihood: -155898.994507
EM: Round [78] log likelihood: -155898.994306
EM: Round [79] log likelihood: -155898.994113
EM: Round [80] log likelihood: -155898.993928
EM: Round [81] log likelihood: -155898.993750
EM: Round [82] log likelihood: -155898.993578
EM: Round [83] log likelihood: -155898.993413
EM: Round [84] log likelihood: -155898.993253
EM: Round [85] log likelihood: -155898.993099
EM: Round [86] log likelihood: -155898.992950
EM: Round [87] log likelihood: -155898.992806
EM: Round [88] log likelihood: -155898.992666
EM: Round [89] log likelihood: -155898.992531
EM: Round [90] log likelihood: -155898.992400
EM: Round [91] log likelihood: -155898.992273
EM: Round [92] log likelihood: -155898.992150
EM: Round [93] log likelihood: -155898.992030
EM: Round [94] log likelihood: -155898.991914
EM: Round [95] log likelihood: -155898.991801
EM: Round [96] log likelihood: -155898.991692
EM: Round [97] log likelihood: -155898.991585
EM: Round [98] log likelihood: -155898.991481
EM: Round [99] log likelihood: -155898.991379
EM: Round [100] log likelihood: -155898.991281
EM: Stopping iterations at round 100 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -155836.496303
EM: Round [1] log likelihood: -155725.058139
EM: Round [2] log likelihood: -155684.470023
EM: Round [3] log likelihood: -155666.365637
EM: Round [4] log likelihood: -155657.327838
EM: Round [5] log likelihood: -155652.460847
EM: Round [6] log likelihood: -155649.672206
EM: Round [7] log likelihood: -155647.982254
EM: Round [8] log likelihood: -155646.904098
EM: Round [9] log likelihood: -155646.183820
EM: Round [10] log likelihood: -155645.682963
EM: Round [11] log likelihood: -155645.322681
EM: Round [12] log likelihood: -155645.056131
EM: Round [13] log likelihood: -155644.854317
EM: Round [14] log likelihood: -155644.698592
EM: Round [15] log likelihood: -155644.576529
EM: Round [16] log likelihood: -155644.479584
EM: Round [17] log likelihood: -155644.401722
EM: Round [18] log likelihood: -155644.338577
EM: Round [19] log likelihood: -155644.286928
EM: Round [20] log likelihood: -155644.244360
EM: Round [21] log likelihood: -155644.209035
EM: Round [22] log likelihood: -155644.179539
EM: Round [23] log likelihood: -155644.154767
EM: Round [24] log likelihood: -155644.133855
EM: Round [25] log likelihood: -155644.116115
EM: Round [26] log likelihood: -155644.100997
EM: Round [27] log likelihood: -155644.088061
EM: Round [28] log likelihood: -155644.076948
EM: Round [29] log likelihood: -155644.067366
EM: Round [30] log likelihood: -155644.059075
EM: Round [31] log likelihood: -155644.051879
EM: Round [32] log likelihood: -155644.045614
EM: Round [33] log likelihood: -155644.040143
EM: Round [34] log likelihood: -155644.035353
EM: Round [35] log likelihood: -155644.031148
EM: Round [36] log likelihood: -155644.027447
EM: Round [37] log likelihood: -155644.024183
EM: Round [38] log likelihood: -155644.021295
EM: Round [39] log likelihood: -155644.018737
EM: Round [40] log likelihood: -155644.016464
EM: Round [41] log likelihood: -155644.014441
EM: Round [42] log likelihood: -155644.012637
EM: Round [43] log likelihood: -155644.011024
EM: Round [44] log likelihood: -155644.009580
EM: Round [45] log likelihood: -155644.008283
EM: Round [46] log likelihood: -155644.007118
EM: Round [47] log likelihood: -155644.006067
EM: Round [48] log likelihood: -155644.005119
EM: Round [49] log likelihood: -155644.004261
EM: Round [50] log likelihood: -155644.003483
EM: Round [51] log likelihood: -155644.002777
EM: Round [52] log likelihood: -155644.002133
EM: Round [53] log likelihood: -155644.001546
EM: Round [54] log likelihood: -155644.001010
EM: Round [55] log likelihood: -155644.000519
EM: Round [56] log likelihood: -155644.000067
EM: Round [57] log likelihood: -155643.999652
EM: Round [58] log likelihood: -155643.999269
EM: Round [59] log likelihood: -155643.998915
EM: Round [60] log likelihood: -155643.998587
EM: Round [61] log likelihood: -155643.998282
EM: Round [62] log likelihood: -155643.997998
EM: Round [63] log likelihood: -155643.997734
EM: Round [64] log likelihood: -155643.997486
EM: Round [65] log likelihood: -155643.997254
EM: Round [66] log likelihood: -155643.997036
EM: Round [67] log likelihood: -155643.996831
EM: Round [68] log likelihood: -155643.996637
EM: Round [69] log likelihood: -155643.996454
EM: Round [70] log likelihood: -155643.996280
EM: Round [71] log likelihood: -155643.996115
EM: Round [72] log likelihood: -155643.995958
EM: Round [73] log likelihood: -155643.995808
EM: Round [74] log likelihood: -155643.995664
EM: Round [75] log likelihood: -155643.995527
EM: Round [76] log likelihood: -155643.995395
EM: Round [77] log likelihood: -155643.995268
EM: Round [78] log likelihood: -155643.995146
EM: Round [79] log likelihood: -155643.995029
EM: Round [80] log likelihood: -155643.994915
EM: Round [81] log likelihood: -155643.994805
EM: Round [82] log likelihood: -155643.994699
EM: Round [83] log likelihood: -155643.994595
EM: Round [84] log likelihood: -155643.994495
EM: Round [85] log likelihood: -155643.994398
EM: Stopping iterations at round 85 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 45595088 > /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir > /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir --annotate /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 876, filtered: 7316)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.OIvcXR9nwJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.OIvcXR9nwJ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000248376.2]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000153363.13]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000213144.2]
WARNING, no entry stored in dbm for [ENSG00000278975.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000267779.7]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000280310.1]
WARNING, no entry stored in dbm for [ENSG00000231588.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000227982.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000235705.6]
WARNING, no entry stored in dbm for [ENSG00000210135.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000269600.2]
WARNING, no entry stored in dbm for [ENSG00000271551.2]
WARNING, no entry stored in dbm for [ENSG00000280219.1]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000287514.2]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000227671.4]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000218016.2]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000287586.1]
WARNING, no entry stored in dbm for [ENSG00000287974.1]
WARNING, no entry stored in dbm for [ENSG00000288321.1]
WARNING, no entry stored in dbm for [ENSG00000227165.9]
WARNING, no entry stored in dbm for [ENSG00000285961.1]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000285042.1]
WARNING, no entry stored in dbm for [ENSG00000267469.1]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000260144.1]
WARNING, no entry stored in dbm for [ENSG00000273272.2]
WARNING, no entry stored in dbm for [ENSG00000230836.1]
WARNING, no entry stored in dbm for [ENSG00000208023.3]
WARNING, no entry stored in dbm for [ENSG00000282221.1]
WARNING, no entry stored in dbm for [ENSG00000172250.16]
WARNING, no entry stored in dbm for [ENSG00000230091.6]
WARNING, no entry stored in dbm for [ENSG00000237590.1]
WARNING, no entry stored in dbm for [ENSG00000215296.10]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000235833.1]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000204685.7]
WARNING, no entry stored in dbm for [ENSG00000205482.9]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000277041.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000146521.10]
WARNING, no entry stored in dbm for [ENSG00000240498.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000287739.1]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000282021.1]
WARNING, no entry stored in dbm for [ENSG00000225246.1]
WARNING, no entry stored in dbm for [ENSG00000213740.2]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000265735.2]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000276168.1]
WARNING, no entry stored in dbm for [ENSG00000243780.1]
WARNING, no entry stored in dbm for [ENSG00000240480.1]
WARNING, no entry stored in dbm for [ENSG00000225678.2]
WARNING, no entry stored in dbm for [ENSG00000226166.2]
WARNING, no entry stored in dbm for [ENSG00000236548.2]
WARNING, no entry stored in dbm for [ENSG00000265315.1]
WARNING, no entry stored in dbm for [ENSG00000243738.3]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000227444.1]
WARNING, no entry stored in dbm for [ENSG00000279192.1]
WARNING, no entry stored in dbm for [ENSG00000259241.1]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000241111.1]
WARNING, no entry stored in dbm for [ENSG00000236255.2]
WARNING, no entry stored in dbm for [ENSG00000234570.1]
WARNING, no entry stored in dbm for [ENSG00000270788.1]
WARNING, no entry stored in dbm for [ENSG00000227466.1]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000248113.2]
WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000214353.8]
WARNING, no entry stored in dbm for [ENSG00000254940.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000229268.1]
WARNING, no entry stored in dbm for [ENSG00000248092.8]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000270230.1]
WARNING, no entry stored in dbm for [ENSG00000270230.1]
WARNING, no entry stored in dbm for [ENSG00000263241.1]
WARNING, no entry stored in dbm for [ENSG00000232373.2]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000273763.2]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000247373.3]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000221063.3]
WARNING, no entry stored in dbm for [ENSG00000221063.3]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000221792.1]
WARNING, no entry stored in dbm for [ENSG00000272142.4]
WARNING, no entry stored in dbm for [ENSG00000169075.7]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000235142.10]
WARNING, no entry stored in dbm for [ENSG00000245662.4]
WARNING, no entry stored in dbm for [ENSG00000239454.1]
WARNING, no entry stored in dbm for [ENSG00000233521.7]
WARNING, no entry stored in dbm for [ENSG00000286785.1]
WARNING, no entry stored in dbm for [ENSG00000229563.7]
WARNING, no entry stored in dbm for [ENSG00000203930.12]
WARNING, no entry stored in dbm for [ENSG00000196273.8]
WARNING, no entry stored in dbm for [ENSG00000279649.1]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000286217.2]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000257528.1]
WARNING, no entry stored in dbm for [ENSG00000145063.15]
WARNING, no entry stored in dbm for [ENSG00000232406.7]
WARNING, no entry stored in dbm for [ENSG00000214617.9]
WARNING, no entry stored in dbm for [ENSG00000204670.7]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000219102.3]
WARNING, no entry stored in dbm for [ENSG00000260689.2]
WARNING, no entry stored in dbm for [ENSG00000236539.3]
WARNING, no entry stored in dbm for [ENSG00000213568.4]
WARNING, no entry stored in dbm for [ENSG00000231470.1]
WARNING, no entry stored in dbm for [ENSG00000203489.3]
WARNING, no entry stored in dbm for [ENSG00000265541.1]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000197308.9]
WARNING, no entry stored in dbm for [ENSG00000235964.1]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000161103.11]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000213140.3]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000213075.7]
WARNING, no entry stored in dbm for [ENSG00000241570.8]
WARNING, no entry stored in dbm for [ENSG00000248334.6]
WARNING, no entry stored in dbm for [ENSG00000225362.10]
WARNING, no entry stored in dbm for [ENSG00000225465.10]
WARNING, no entry stored in dbm for [ENSG00000235903.9]
WARNING, no entry stored in dbm for [ENSG00000261416.1]
WARNING, no entry stored in dbm for [ENSG00000283098.2]
WARNING, no entry stored in dbm for [ENSG00000226445.2]
WARNING, no entry stored in dbm for [ENSG00000224778.1]
WARNING, no entry stored in dbm for [ENSG00000260793.2]
WARNING, no entry stored in dbm for [ENSG00000233124.2]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000244716.3]
WARNING, no entry stored in dbm for [ENSG00000215560.2]
WARNING, no entry stored in dbm for [ENSG00000203808.12]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000240132.1]
WARNING, no entry stored in dbm for [ENSG00000286214.1]
WARNING, no entry stored in dbm for [ENSG00000213338.3]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000236736.1]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000279711.1]
WARNING, no entry stored in dbm for [ENSG00000204397.9]
WARNING, no entry stored in dbm for [ENSG00000269895.1]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000163016.10]
WARNING, no entry stored in dbm for [ENSG00000268942.2]
WARNING, no entry stored in dbm for [ENSG00000285847.2]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000260604.2]
WARNING, no entry stored in dbm for [ENSG00000232295.7]
WARNING, no entry stored in dbm for [ENSG00000225886.3]
WARNING, no entry stored in dbm for [ENSG00000277879.1]
WARNING, no entry stored in dbm for [ENSG00000247287.3]
WARNING, no entry stored in dbm for [ENSG00000223528.7]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000272195.1]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000278177.1]
WARNING, no entry stored in dbm for [ENSG00000223944.2]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000261060.1]
WARNING, no entry stored in dbm for [ENSG00000237137.1]
WARNING, no entry stored in dbm for [ENSG00000233183.3]
WARNING, no entry stored in dbm for [ENSG00000258028.3]
WARNING, no entry stored in dbm for [ENSG00000227220.1]
WARNING, no entry stored in dbm for [ENSG00000279080.1]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000234948.2]
WARNING, no entry stored in dbm for [ENSG00000238039.1]
WARNING, no entry stored in dbm for [ENSG00000214999.3]
WARNING, no entry stored in dbm for [ENSG00000214999.3]
WARNING, no entry stored in dbm for [ENSG00000235881.2]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000245025.3]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000273230.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000251095.7]
WARNING, no entry stored in dbm for [ENSG00000240787.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000261471.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000266283.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000279555.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000213280.2]
WARNING, no entry stored in dbm for [ENSG00000267408.1]
WARNING, no entry stored in dbm for [ENSG00000267342.1]
WARNING, no entry stored in dbm for [ENSG00000287424.1]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000271848.2]
WARNING, no entry stored in dbm for [ENSG00000287188.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000286223.1]
WARNING, no entry stored in dbm for [ENSG00000229334.1]
WARNING, no entry stored in dbm for [ENSG00000250167.1]
WARNING, no entry stored in dbm for [ENSG00000260894.1]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000259273.1]
WARNING, no entry stored in dbm for [ENSG00000250140.1]
WARNING, no entry stored in dbm for [ENSG00000258732.1]
WARNING, no entry stored in dbm for [ENSG00000249863.2]
WARNING, no entry stored in dbm for [ENSG00000186019.11]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000279753.1]
WARNING, no entry stored in dbm for [ENSG00000267723.1]
WARNING, no entry stored in dbm for [ENSG00000263547.2]
WARNING, no entry stored in dbm for [ENSG00000235522.6]
WARNING, no entry stored in dbm for [ENSG00000267774.2]
WARNING, no entry stored in dbm for [ENSG00000283695.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000225813.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000260228.6]
WARNING, no entry stored in dbm for [ENSG00000280416.1]
WARNING, no entry stored in dbm for [ENSG00000269243.1]
WARNING, no entry stored in dbm for [ENSG00000262202.4]
WARNING, no entry stored in dbm for [ENSG00000233565.1]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000262420.3]
WARNING, no entry stored in dbm for [ENSG00000272807.1]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000279516.2]
WARNING, no entry stored in dbm for [ENSG00000285904.1]
WARNING, no entry stored in dbm for [ENSG00000262456.1]
WARNING, no entry stored in dbm for [ENSG00000278959.1]
WARNING, no entry stored in dbm for [ENSG00000277476.1]
WARNING, no entry stored in dbm for [ENSG00000272219.1]
WARNING, no entry stored in dbm for [ENSG00000278920.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000280255.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000255367.3]
WARNING, no entry stored in dbm for [ENSG00000239291.1]
WARNING, no entry stored in dbm for [ENSG00000267328.1]
WARNING, no entry stored in dbm for [ENSG00000267328.1]
WARNING, no entry stored in dbm for [ENSG00000235776.2]
WARNING, no entry stored in dbm for [ENSG00000242248.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.OIvcXR9nwJ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)