Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/9ca2cff65f185658510311007c3951/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/9ca2cff65f185658510311007c3951/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/6f5a83f5c8ce7263522c9e987afec8/tih_rna_sample_00588_B23MVV7LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/6f5a83f5c8ce7263522c9e987afec8/tih_rna_sample_00588_B23MVV7LT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory