AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 526
Pass (FILTER=PASS): 103 (19.6%)
Fail (FILTER=FAIL): 423 (80.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 112
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 69
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 39
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 25
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 22
confidence_below_min(low<high): 20
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
Breakdown by confidence:
high: 103 pass, 17 fail (total: 120)
low: 0 pass, 164 fail (total: 164)
medium: 0 pass, 242 fail (total: 242)
Arriba filter: 526 rows -> 103 PASS; wrote tih_rna_sample_00665_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00665_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00665_B23MVV7LT4_1.arriba.fusions.filter_summary.txt