[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0002_RNA_0001_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	239568152
Known Splicing Events:	235862589
Partial Novel Splicing Events:	1552655
Novel Splicing Events:	2084551
Filtered Splicing Events:	68357

Total splicing  Junctions:	465812
Known Splicing Junctions:	244925
Partial Novel Splicing Junctions:	152573
Novel Splicing Junctions:	68314

===================================================================
Create BED file ...
Create Interact file ...