Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/8acf4500fe147c230bdadfd08c4cae/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/8acf4500fe147c230bdadfd08c4cae/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/507b45a09ee0677136f3c27e8ebdf4/tih_rna_sample_00599_B23MVV7LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/0b9d73cd2a53ff945fa9c6bccd0277/tih_rna_sample_00599_B23MVV7LT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: tih_rna_sample_00599_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00599_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00599_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00599_B23MVV7LT4_1
  Mean Fragment Length: 122.3 bp
  Median Fragment Length: 114.0 bp
  pct_mito_est_counts: 0.007%
  pct_ribo_est_counts: 1.295%
  pct_hk_est_counts: 0.432%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.015%
  pct_ribo_tpm: 3.953%
  pct_hk_tpm: 0.713%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.015%