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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/996d90ac2397899538ba8df0e98a98/tih_rna_sample_00591_B23MVV7LT4_1.log
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/5dd34b71efc280fd787afd30fe9196/tih_rna_sample_00761_B23MVV7LT4_1_2_fastqc.zip
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/0baca51135583e80610eb4ac7904cb/tih_rna_sample_00604_B23MVV7LT4_1_2_fastqc.zip
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/283e9ac32518e196d901bd7e928d7d/tih_rna_sample_00570_B23MVV7LT4_1_1_fastqc.zip
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/6570dafe38e091076f34103d9b7854/tih_rna_sample_00709_B23MVV7LT4_1.inner_distance_freq.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/6dce2b8dd4460c6f66129670970289/tih_rna_sample_00680_B23MVV7LT4_1.pos.DupRate.xls
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/83650b6ae75e7279c74da00ec363a4/tih_rna_sample_00588_B23MVV7LT4_1.junctionSaturation_plot.r
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/7da925d2a9815cd5c8f3874ca20756/tih_rna_sample_00758_B23MVV7LT4_1_contamination_mqc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/fe06692eda6b728d7132d85fbce820/tih_rna_sample_00572_B23MVV7LT4_1_rseqc_extra_mqc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/5fd395a0f0d426bfaa8e22574af8e2/tih_rna_sample_00581_B23MVV7LT4_1_kallisto_mqc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/37/9aa1d30fdeef7034bf1cbb36550f55/tih_rna_sample_00731_B23MVV7LT4_1.junctionSaturation_plot.r
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/1f04b25aa3f7f018b3c59abdbfcbbb/tih_rna_sample_00677_B23MVV7LT4_1.md.bam.metrics
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/cafaa0faa92d48ef62afb526349617/tih_rna_sample_00763_B23MVV7LT4_1.lc_extrap.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/b8c03369d674cecd5e26cb405e8da3/tih_rna_sample_00649_B23MVV7LT4_1.junction_annotation.log
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/7ccc039d396db15fc5ad55c33ab7c5/tih_rna_sample_00762_B23MVV7LT4_1_preseq_mqc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/4113935732ed7a2899921bd640a503/tih_rna_sample_00592_B23MVV7LT4_1.junctionSaturation_plot.r
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/567bcfb6c5b0480b7881c10e4f19e2/tih_rna_sample_00685_B23MVV7LT4_1_trimmed_2_fastqc.zip
==> STAGING COMPLETE (2404 inputs)


  /// MultiQC 🔍 | v1.21

|           multiqc | MultiQC Version v1.35 now available!
|           multiqc | Module(s) in config.run_modules are unknown: arriba
|           multiqc | Only using modules: custom_content, fastqc, fastp, star, samtools, picard, kallisto, rseqc, preseq
|           multiqc | Search path : /tmp/nxf.SqDJGjFwtr
|         searching | ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 100% 2439/2439  
|    custom_content | rseqc_extra_metrics: Found 96 General Statistics columns
|    custom_content | preseq_metrics: Found 96 General Statistics columns
|    custom_content | kallisto_qc_metrics: Found 96 General Statistics columns
|    custom_content | rna_contamination: Found 96 General Statistics columns
|    custom_content | seqtools_metrics: Found 96 General Statistics columns
|    custom_content | nf-core-rnafusion-methods-description: Found 1 sample (html)
|    custom_content | nf-core-rnafusion-summary: Found 1 sample (html)
|          kallisto | Found 96 reports
|            picard | Found 96 MarkDuplicates reports
|            preseq | Found 96 reports
|             rseqc | Found 96 read_distribution reports
|             rseqc | Found 96 inner_distance reports
|             rseqc | Found 96 read_duplication reports
|             rseqc | Found 96 junction_annotation reports
|             rseqc | Found 96 junction_saturation reports
|             rseqc | Found 96 infer_experiment reports
|             rseqc | Found 96 bam_stat reports
|              star | Found 96 reports and 96 gene count files
|             fastp | Found 96 reports
|            fastqc | Found 384 reports
|            fastqc | Found 192 reports
|           multiqc | Report      : multiqc_report.html
|           multiqc | Data        : multiqc_data
|           multiqc | Plots       : multiqc_plots
|           multiqc | MultiQC complete