Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/97ab1bce25c0e4547c98ede00b67eb/tih_rna_sample_00693_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/6b2e774d9a6d8bc65a05fcbd7d84cc/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/6b2e774d9a6d8bc65a05fcbd7d84cc/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory