File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/61034f35550756f0ce245776079e5a/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 09:39:34
                             Started mapping on |	Jun 08 09:46:04
                                    Finished on |	Jun 08 10:29:22
       Mapping speed, Million of reads per hour |	302.05

                          Number of input reads |	217976912
                      Average input read length |	256
                                    UNIQUE READS:
                   Uniquely mapped reads number |	208662031
                        Uniquely mapped reads % |	95.73%
                          Average mapped length |	255.34
                       Number of splices: Total |	221454201
            Number of splices: Annotated (sjdb) |	217356877
                       Number of splices: GT/AG |	218637732
                       Number of splices: GC/AG |	1587363
                       Number of splices: AT/AC |	162450
               Number of splices: Non-canonical |	1066656
                      Mismatch rate per base, % |	0.25%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.17
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.62
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	6454513
             % of reads mapped to multiple loci |	2.96%
        Number of reads mapped to too many loci |	543662
             % of reads mapped to too many loci |	0.25%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2041455
                 % of reads unmapped: too short |	0.94%
                Number of reads unmapped: other |	275251
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%