AIH curated blacklist: matched 8 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 317
Pass (FILTER=PASS): 49 (15.5%)
Fail (FILTER=FAIL): 268 (84.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 8
All 8 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 78
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 45
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 25
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high): 17
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
total_reads_below_min(7.0<8.0): 2
total_reads_below_min(3.0<8.0): 2
Breakdown by confidence:
high: 49 pass, 8 fail (total: 57)
low: 0 pass, 126 fail (total: 126)
medium: 0 pass, 134 fail (total: 134)
Arriba filter: 317 rows -> 49 PASS; wrote tih_rna_sample_00754_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00754_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00754_B23MVV7LT4_1.arriba.fusions.filter_summary.txt