AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 209
Pass (FILTER=PASS): 51 (24.4%)
Fail (FILTER=FAIL): 158 (75.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 55
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 24
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high): 12
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
aih_curated_blacklist: 1
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(6.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 51 pass, 3 fail (total: 54)
low: 0 pass, 78 fail (total: 78)
medium: 0 pass, 77 fail (total: 77)
Arriba filter: 209 rows -> 51 PASS; wrote tih_rna_sample_00742_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00742_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00742_B23MVV7LT4_1.arriba.fusions.filter_summary.txt