File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/29ba9e8537d7fd62d1ca18b578161a/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:20:26
                             Started mapping on |	Jun 08 10:26:54
                                    Finished on |	Jun 08 11:38:05
       Mapping speed, Million of reads per hour |	249.57

                          Number of input reads |	296083355
                      Average input read length |	266
                                    UNIQUE READS:
                   Uniquely mapped reads number |	275178408
                        Uniquely mapped reads % |	92.94%
                          Average mapped length |	265.83
                       Number of splices: Total |	318863520
            Number of splices: Annotated (sjdb) |	314717795
                       Number of splices: GT/AG |	315049641
                       Number of splices: GC/AG |	2300764
                       Number of splices: AT/AC |	315575
               Number of splices: Non-canonical |	1197540
                      Mismatch rate per base, % |	0.22%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.84
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.77
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	16907302
             % of reads mapped to multiple loci |	5.71%
        Number of reads mapped to too many loci |	613207
             % of reads mapped to too many loci |	0.21%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2838242
                 % of reads unmapped: too short |	0.96%
                Number of reads unmapped: other |	546196
                     % of reads unmapped: other |	0.18%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%