Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/d5b30b5c555e65f86d396f2b0b819d/tih_rna_sample_00583_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/e88fd7fc7045f143707b3a331bf8bc/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/52c75d9febc354ebfc80f70e82652e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/52c75d9febc354ebfc80f70e82652e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/b724c06212afc95d99568379522bf8/tih_rna_sample_00583_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 220980006
[W::hts_idx_load3] The index file is older than the data file: tih_rna_sample_00583_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	220980006
Known Splicing Events:	218632492
Partial Novel Splicing Events:	1385359
Novel Splicing Events:	863533
Filtered Splicing Events:	98622

Total splicing  Junctions:	415561
Known Splicing Junctions:	245947
Partial Novel Splicing Junctions:	98486
Novel Splicing Junctions:	71128

===================================================================
Create BED file ...
Create Interact file ...