AIH curated blacklist: matched 8 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 340
Pass (FILTER=PASS): 54 (15.9%)
Fail (FILTER=FAIL): 286 (84.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 8
All 8 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 59
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 47
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 21
confidence_below_min(low<high): 19
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
Breakdown by confidence:
high: 54 pass, 4 fail (total: 58)
low: 0 pass, 153 fail (total: 153)
medium: 0 pass, 129 fail (total: 129)
Arriba filter: 340 rows -> 54 PASS; wrote tih_rna_sample_00676_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00676_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00676_B23MVV7LT4_1.arriba.fusions.filter_summary.txt