Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/7d2eb1245b241dd29bf361aeaafab0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/abeefe646e9a65e7957e99d1867642/tih_rna_sample_00588_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/7d2eb1245b241dd29bf361aeaafab0/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory