File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/5fd395a0f0d426bfaa8e22574af8e2/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e8/85c951e61deea8cac14258a0eb390d/tih_rna_sample_00581_B23MVV7LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/5fd395a0f0d426bfaa8e22574af8e2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/5fd395a0f0d426bfaa8e22574af8e2/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/59571b23919c904fc4993afec016e7/tih_rna_sample_00581_B23MVV7LT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: tih_rna_sample_00581_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00581_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00581_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00581_B23MVV7LT4_1
  Mean Fragment Length: 130.6 bp
  Median Fragment Length: 122.0 bp
  pct_mito_est_counts: 0.005%
  pct_ribo_est_counts: 1.11%
  pct_hk_est_counts: 0.494%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.01%
  pct_ribo_tpm: 3.386%
  pct_hk_tpm: 0.75%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.01%