Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/f116aae20db1d95cbb25e464197c3b/tih_rna_sample_00598_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/910b222dec9d2240a333ee82595206/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/910b222dec9d2240a333ee82595206/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory