.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (tih_rna_sample_00677_B23MVV7LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/a8f8ae3a4219cbd08f848a5967a991/.command.err
Size: 23.8 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (tih_rna_sample_00677_B23MVV7LT4_1)
Attempt
Content

-ctat genome lib [/tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.mUade6xaXf/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.mUade6xaXf/./star-fusion.preliminary
-sample contains 20339008 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir  -J /tmp/nxf.mUade6xaXf/tih_rna_sample_00677_B23MVV7LT4_1.Chimeric.out.junction  -O /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.mUade6xaXf/tih_rna_sample_00677_B23MVV7LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[340000], rate=69863.01/min -building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[340000], rate=64556.96/min -building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[340000], rate=60895.52/min -building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[340000], rate=50246.31/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4285714.29 reads per min processed...  
 4000000.00 reads per min processed...  
 3818181.82 reads per min processed...  
 4000000.00 reads per min processed...  
 4153846.15 reads per min processed...  
 4000000.00 reads per min processed...  
 4125000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.mUade6xaXf/tih_rna_sample_00677_B23MVV7LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -33878.152988
EM: Round [1] log likelihood: -33813.058862
EM: Round [2] log likelihood: -33791.333423
EM: Round [3] log likelihood: -33781.848162
EM: Round [4] log likelihood: -33777.053187
EM: Round [5] log likelihood: -33774.429073
EM: Round [6] log likelihood: -33772.916298
EM: Round [7] log likelihood: -33772.005417
EM: Round [8] log likelihood: -33771.434413
EM: Round [9] log likelihood: -33771.062916
EM: Round [10] log likelihood: -33770.813030
EM: Round [11] log likelihood: -33770.639962
EM: Round [12] log likelihood: -33770.517029
EM: Round [13] log likelihood: -33770.427786
EM: Round [14] log likelihood: -33770.361775
EM: Round [15] log likelihood: -33770.312147
EM: Round [16] log likelihood: -33770.274302
EM: Round [17] log likelihood: -33770.245077
EM: Round [18] log likelihood: -33770.222257
EM: Round [19] log likelihood: -33770.204255
EM: Round [20] log likelihood: -33770.189924
EM: Round [21] log likelihood: -33770.178418
EM: Round [22] log likelihood: -33770.169107
EM: Round [23] log likelihood: -33770.161516
EM: Round [24] log likelihood: -33770.155282
EM: Round [25] log likelihood: -33770.150128
EM: Round [26] log likelihood: -33770.145839
EM: Round [27] log likelihood: -33770.142245
EM: Round [28] log likelihood: -33770.139215
EM: Round [29] log likelihood: -33770.136642
EM: Round [30] log likelihood: -33770.134445
EM: Round [31] log likelihood: -33770.132555
EM: Round [32] log likelihood: -33770.130919
EM: Round [33] log likelihood: -33770.129494
EM: Round [34] log likelihood: -33770.128244
EM: Round [35] log likelihood: -33770.127141
EM: Round [36] log likelihood: -33770.126162
EM: Round [37] log likelihood: -33770.125286
EM: Round [38] log likelihood: -33770.124499
EM: Round [39] log likelihood: -33770.123787
EM: Round [40] log likelihood: -33770.123140
EM: Round [41] log likelihood: -33770.122549
EM: Round [42] log likelihood: -33770.122006
EM: Round [43] log likelihood: -33770.121505
EM: Round [44] log likelihood: -33770.121041
EM: Round [45] log likelihood: -33770.120610
EM: Round [46] log likelihood: -33770.120208
EM: Round [47] log likelihood: -33770.119831
EM: Round [48] log likelihood: -33770.119478
EM: Round [49] log likelihood: -33770.119145
EM: Round [50] log likelihood: -33770.118832
EM: Round [51] log likelihood: -33770.118536
EM: Round [52] log likelihood: -33770.118255
EM: Round [53] log likelihood: -33770.117990
EM: Round [54] log likelihood: -33770.117737
EM: Round [55] log likelihood: -33770.117497
EM: Round [56] log likelihood: -33770.117269
EM: Round [57] log likelihood: -33770.117052
EM: Round [58] log likelihood: -33770.116844
EM: Round [59] log likelihood: -33770.116647
EM: Round [60] log likelihood: -33770.116458
EM: Round [61] log likelihood: -33770.116277
EM: Round [62] log likelihood: -33770.116105
EM: Round [63] log likelihood: -33770.115940
EM: Round [64] log likelihood: -33770.115782
EM: Round [65] log likelihood: -33770.115632
EM: Round [66] log likelihood: -33770.115487
EM: Round [67] log likelihood: -33770.115349
EM: Round [68] log likelihood: -33770.115216
EM: Round [69] log likelihood: -33770.115089
EM: Round [70] log likelihood: -33770.114968
EM: Round [71] log likelihood: -33770.114851
EM: Round [72] log likelihood: -33770.114740
EM: Round [73] log likelihood: -33770.114633
EM: Round [74] log likelihood: -33770.114530
EM: Round [75] log likelihood: -33770.114431
EM: Stopping iterations at round 75 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -33841.954047
EM: Round [1] log likelihood: -33785.904989
EM: Round [2] log likelihood: -33767.967480
EM: Round [3] log likelihood: -33760.470291
EM: Round [4] log likelihood: -33756.775540
EM: Round [5] log likelihood: -33754.769074
EM: Round [6] log likelihood: -33753.608483
EM: Round [7] log likelihood: -33752.902982
EM: Round [8] log likelihood: -33752.454956
EM: Round [9] log likelihood: -33752.159126
EM: Round [10] log likelihood: -33751.957013
EM: Round [11] log likelihood: -33751.814821
EM: Round [12] log likelihood: -33751.712256
EM: Round [13] log likelihood: -33751.636689
EM: Round [14] log likelihood: -33751.579999
EM: Round [15] log likelihood: -33751.536803
EM: Round [16] log likelihood: -33751.503443
EM: Round [17] log likelihood: -33751.477375
EM: Round [18] log likelihood: -33751.456791
EM: Round [19] log likelihood: -33751.440384
EM: Round [20] log likelihood: -33751.427196
EM: Round [21] log likelihood: -33751.416514
EM: Round [22] log likelihood: -33751.407797
EM: Round [23] log likelihood: -33751.400637
EM: Round [24] log likelihood: -33751.394717
EM: Round [25] log likelihood: -33751.389792
EM: Round [26] log likelihood: -33751.385670
EM: Round [27] log likelihood: -33751.382198
EM: Round [28] log likelihood: -33751.379258
EM: Round [29] log likelihood: -33751.376752
EM: Round [30] log likelihood: -33751.374603
EM: Round [31] log likelihood: -33751.372749
EM: Round [32] log likelihood: -33751.371141
EM: Round [33] log likelihood: -33751.369736
EM: Round [34] log likelihood: -33751.368502
EM: Round [35] log likelihood: -33751.367410
EM: Round [36] log likelihood: -33751.366440
EM: Round [37] log likelihood: -33751.365572
EM: Round [38] log likelihood: -33751.364791
EM: Round [39] log likelihood: -33751.364084
EM: Round [40] log likelihood: -33751.363441
EM: Round [41] log likelihood: -33751.362854
EM: Round [42] log likelihood: -33751.362315
EM: Round [43] log likelihood: -33751.361817
EM: Round [44] log likelihood: -33751.361357
EM: Round [45] log likelihood: -33751.360929
EM: Round [46] log likelihood: -33751.360529
EM: Round [47] log likelihood: -33751.360156
EM: Round [48] log likelihood: -33751.359806
EM: Round [49] log likelihood: -33751.359476
EM: Round [50] log likelihood: -33751.359166
EM: Round [51] log likelihood: -33751.358872
EM: Round [52] log likelihood: -33751.358595
EM: Round [53] log likelihood: -33751.358332
EM: Round [54] log likelihood: -33751.358083
EM: Round [55] log likelihood: -33751.357846
EM: Round [56] log likelihood: -33751.357620
EM: Round [57] log likelihood: -33751.357406
EM: Round [58] log likelihood: -33751.357201
EM: Round [59] log likelihood: -33751.357006
EM: Round [60] log likelihood: -33751.356820
EM: Round [61] log likelihood: -33751.356643
EM: Round [62] log likelihood: -33751.356473
EM: Round [63] log likelihood: -33751.356311
EM: Round [64] log likelihood: -33751.356156
EM: Round [65] log likelihood: -33751.356008
EM: Round [66] log likelihood: -33751.355866
EM: Round [67] log likelihood: -33751.355730
EM: Round [68] log likelihood: -33751.355600
EM: Round [69] log likelihood: -33751.355475
EM: Round [70] log likelihood: -33751.355356
EM: Round [71] log likelihood: -33751.355242
EM: Round [72] log likelihood: -33751.355133
EM: Round [73] log likelihood: -33751.355028
EM: Round [74] log likelihood: -33751.354927
EM: Round [75] log likelihood: -33751.354831
EM: Stopping iterations at round 75 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 20339008 > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir --annotate /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir
-done, see /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 272, filtered: 2221)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
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WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000238184.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000280184.2]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000257398.8]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000278399.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000287664.1]
WARNING, no entry stored in dbm for [ENSG00000225099.1]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000259570.1]
WARNING, no entry stored in dbm for [ENSG00000235251.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000227091.2]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000236968.1]
WARNING, no entry stored in dbm for [ENSG00000286417.1]
WARNING, no entry stored in dbm for [ENSG00000254635.6]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000273129.2]
WARNING, no entry stored in dbm for [ENSG00000249740.3]
WARNING, no entry stored in dbm for [ENSG00000241956.10]
WARNING, no entry stored in dbm for [ENSG00000196566.2]
WARNING, no entry stored in dbm for [ENSG00000260389.1]
WARNING, no entry stored in dbm for [ENSG00000249816.7]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000234634.2]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000225465.10]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000223723.1]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000273363.1]
WARNING, no entry stored in dbm for [ENSG00000251548.1]
WARNING, no entry stored in dbm for [ENSG00000285486.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000285700.1]
WARNING, no entry stored in dbm for [ENSG00000258334.1]
WARNING, no entry stored in dbm for [ENSG00000272710.2]
WARNING, no entry stored in dbm for [ENSG00000240518.2]
WARNING, no entry stored in dbm for [ENSG00000213361.2]
WARNING, no entry stored in dbm for [ENSG00000266283.1]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000188850.9]
WARNING, no entry stored in dbm for [ENSG00000266535.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.mUade6xaXf/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)