-ctat genome lib [/tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.mUade6xaXf/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.mUade6xaXf/./star-fusion.preliminary -sample contains 20339008 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir -J /tmp/nxf.mUade6xaXf/tih_rna_sample_00677_B23MVV7LT4_1.Chimeric.out.junction -O /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.mUade6xaXf/tih_rna_sample_00677_B23MVV7LT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=42857.14/min [20000], rate=54545.45/min [30000], rate=46153.85/min [40000], rate=43636.36/min [50000], rate=45454.55/min [60000], rate=48648.65/min [70000], rate=52500.00/min [80000], rate=55813.95/min [90000], rate=52427.18/min [100000], rate=51282.05/min [110000], rate=51562.50/min [120000], rate=52173.91/min [130000], rate=54166.67/min [140000], rate=53164.56/min [150000], rate=52325.58/min [160000], rate=51612.90/min [170000], rate=51515.15/min [180000], rate=52682.93/min [190000], rate=54028.44/min [200000], rate=54794.52/min [210000], rate=56000.00/min [220000], rate=58149.78/min [230000], rate=60000.00/min [240000], rate=61276.60/min [250000], rate=62240.66/min [260000], rate=63157.89/min [270000], rate=64031.62/min [280000], rate=65882.35/min [290000], rate=67181.47/min [300000], rate=67669.17/min [310000], rate=68634.69/min [320000], rate=68571.43/min [330000], rate=69230.77/min [340000], rate=69863.01/min -building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=80000.00/min [30000], rate=81818.18/min [40000], rate=75000.00/min [50000], rate=62500.00/min [60000], rate=60000.00/min [70000], rate=60000.00/min [80000], rate=62337.66/min [90000], rate=60674.16/min [100000], rate=61855.67/min [110000], rate=60550.46/min [120000], rate=61538.46/min [130000], rate=62903.23/min [140000], rate=61764.71/min [150000], rate=61224.49/min [160000], rate=61538.46/min [170000], rate=61077.84/min [180000], rate=61016.95/min [190000], rate=60638.30/min [200000], rate=61855.67/min [210000], rate=61165.05/min [220000], rate=61111.11/min [230000], rate=61061.95/min [240000], rate=61538.46/min [250000], rate=61983.47/min [260000], rate=61660.08/min [270000], rate=62068.97/min [280000], rate=62686.57/min [290000], rate=62365.59/min [300000], rate=62283.74/min [310000], rate=63481.23/min [320000], rate=63576.16/min [330000], rate=63665.59/min [340000], rate=64556.96/min -building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=120000.00/min [30000], rate=112500.00/min [40000], rate=126315.79/min [50000], rate=120000.00/min [60000], rate=124137.93/min [70000], rate=123529.41/min [80000], rate=126315.79/min [90000], rate=125581.40/min [100000], rate=130434.78/min [110000], rate=129411.76/min [120000], rate=128571.43/min [130000], rate=127868.85/min [140000], rate=129230.77/min [150000], rate=126760.56/min [160000], rate=104347.83/min [170000], rate=90265.49/min [180000], rate=82442.75/min [190000], rate=78620.69/min [200000], rate=76923.08/min [210000], rate=75903.61/min [220000], rate=75862.07/min [230000], rate=74594.59/min [240000], rate=74611.40/min [250000], rate=74626.87/min [260000], rate=72897.20/min [270000], rate=71365.64/min [280000], rate=70000.00/min [290000], rate=67968.75/min [300000], rate=66666.67/min [310000], rate=65263.16/min [320000], rate=64000.00/min [330000], rate=62857.14/min [340000], rate=60895.52/min -building interval tree based on /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=37500.00/min [20000], rate=38709.68/min [30000], rate=39130.43/min [40000], rate=38709.68/min [50000], rate=38961.04/min [60000], rate=39130.43/min [70000], rate=39252.34/min [80000], rate=39669.42/min [90000], rate=40000.00/min [100000], rate=40540.54/min [110000], rate=40993.79/min [120000], rate=41379.31/min [130000], rate=41489.36/min [140000], rate=41791.04/min [150000], rate=41860.47/min [160000], rate=41558.44/min [170000], rate=41295.55/min [180000], rate=41860.47/min [190000], rate=42696.63/min [200000], rate=43636.36/min [210000], rate=43448.28/min [220000], rate=43564.36/min [230000], rate=44089.46/min [240000], rate=44859.81/min [250000], rate=45592.71/min [260000], rate=46153.85/min [270000], rate=46685.88/min [280000], rate=47727.27/min [290000], rate=48876.40/min [300000], rate=48913.04/min [310000], rate=49865.95/min [320000], rate=50130.55/min [330000], rate=50126.58/min [340000], rate=50246.31/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir --filt_file /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 4800000.00 reads per min processed... 4285714.29 reads per min processed... 4000000.00 reads per min processed... 3818181.82 reads per min processed... 4000000.00 reads per min processed... 4153846.15 reads per min processed... 4000000.00 reads per min processed... 4125000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.mUade6xaXf/tih_rna_sample_00677_B23MVV7LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -33878.152988 EM: Round [1] log likelihood: -33813.058862 EM: Round [2] log likelihood: -33791.333423 EM: Round [3] log likelihood: -33781.848162 EM: Round [4] log likelihood: -33777.053187 EM: Round [5] log likelihood: -33774.429073 EM: Round [6] log likelihood: -33772.916298 EM: Round [7] log likelihood: -33772.005417 EM: Round [8] log likelihood: -33771.434413 EM: Round [9] log likelihood: -33771.062916 EM: Round [10] log likelihood: -33770.813030 EM: Round [11] log likelihood: -33770.639962 EM: Round [12] log likelihood: -33770.517029 EM: Round [13] log likelihood: -33770.427786 EM: Round [14] log likelihood: -33770.361775 EM: Round [15] log likelihood: -33770.312147 EM: Round [16] log likelihood: -33770.274302 EM: Round [17] log likelihood: -33770.245077 EM: Round [18] log likelihood: -33770.222257 EM: Round [19] log likelihood: -33770.204255 EM: Round [20] log likelihood: -33770.189924 EM: Round [21] log likelihood: -33770.178418 EM: Round [22] log likelihood: -33770.169107 EM: Round [23] log likelihood: -33770.161516 EM: Round [24] log likelihood: -33770.155282 EM: Round [25] log likelihood: -33770.150128 EM: Round [26] log likelihood: -33770.145839 EM: Round [27] log likelihood: -33770.142245 EM: Round [28] log likelihood: -33770.139215 EM: Round [29] log likelihood: -33770.136642 EM: Round [30] log likelihood: -33770.134445 EM: Round [31] log likelihood: -33770.132555 EM: Round [32] log likelihood: -33770.130919 EM: Round [33] log likelihood: -33770.129494 EM: Round [34] log likelihood: -33770.128244 EM: Round [35] log likelihood: -33770.127141 EM: Round [36] log likelihood: -33770.126162 EM: Round [37] log likelihood: -33770.125286 EM: Round [38] log likelihood: -33770.124499 EM: Round [39] log likelihood: -33770.123787 EM: Round [40] log likelihood: -33770.123140 EM: Round [41] log likelihood: -33770.122549 EM: Round [42] log likelihood: -33770.122006 EM: Round [43] log likelihood: -33770.121505 EM: Round [44] log likelihood: -33770.121041 EM: Round [45] log likelihood: -33770.120610 EM: Round [46] log likelihood: -33770.120208 EM: Round [47] log likelihood: -33770.119831 EM: Round [48] log likelihood: -33770.119478 EM: Round [49] log likelihood: -33770.119145 EM: Round [50] log likelihood: -33770.118832 EM: Round [51] log likelihood: -33770.118536 EM: Round [52] log likelihood: -33770.118255 EM: Round [53] log likelihood: -33770.117990 EM: Round [54] log likelihood: -33770.117737 EM: Round [55] log likelihood: -33770.117497 EM: Round [56] log likelihood: -33770.117269 EM: Round [57] log likelihood: -33770.117052 EM: Round [58] log likelihood: -33770.116844 EM: Round [59] log likelihood: -33770.116647 EM: Round [60] log likelihood: -33770.116458 EM: Round [61] log likelihood: -33770.116277 EM: Round [62] log likelihood: -33770.116105 EM: Round [63] log likelihood: -33770.115940 EM: Round [64] log likelihood: -33770.115782 EM: Round [65] log likelihood: -33770.115632 EM: Round [66] log likelihood: -33770.115487 EM: Round [67] log likelihood: -33770.115349 EM: Round [68] log likelihood: -33770.115216 EM: Round [69] log likelihood: -33770.115089 EM: Round [70] log likelihood: -33770.114968 EM: Round [71] log likelihood: -33770.114851 EM: Round [72] log likelihood: -33770.114740 EM: Round [73] log likelihood: -33770.114633 EM: Round [74] log likelihood: -33770.114530 EM: Round [75] log likelihood: -33770.114431 EM: Stopping iterations at round 75 due to insufficient improvement in likelihood. EM: Starting log likelihood: -33841.954047 EM: Round [1] log likelihood: -33785.904989 EM: Round [2] log likelihood: -33767.967480 EM: Round [3] log likelihood: -33760.470291 EM: Round [4] log likelihood: -33756.775540 EM: Round [5] log likelihood: -33754.769074 EM: Round [6] log likelihood: -33753.608483 EM: Round [7] log likelihood: -33752.902982 EM: Round [8] log likelihood: -33752.454956 EM: Round [9] log likelihood: -33752.159126 EM: Round [10] log likelihood: -33751.957013 EM: Round [11] log likelihood: -33751.814821 EM: Round [12] log likelihood: -33751.712256 EM: Round [13] log likelihood: -33751.636689 EM: Round [14] log likelihood: -33751.579999 EM: Round [15] log likelihood: -33751.536803 EM: Round [16] log likelihood: -33751.503443 EM: Round [17] log likelihood: -33751.477375 EM: Round [18] log likelihood: -33751.456791 EM: Round [19] log likelihood: -33751.440384 EM: Round [20] log likelihood: -33751.427196 EM: Round [21] log likelihood: -33751.416514 EM: Round [22] log likelihood: -33751.407797 EM: Round [23] log likelihood: -33751.400637 EM: Round [24] log likelihood: -33751.394717 EM: Round [25] log likelihood: -33751.389792 EM: Round [26] log likelihood: -33751.385670 EM: Round [27] log likelihood: -33751.382198 EM: Round [28] log likelihood: -33751.379258 EM: Round [29] log likelihood: -33751.376752 EM: Round [30] log likelihood: -33751.374603 EM: Round [31] log likelihood: -33751.372749 EM: Round [32] log likelihood: -33751.371141 EM: Round [33] log likelihood: -33751.369736 EM: Round [34] log likelihood: -33751.368502 EM: Round [35] log likelihood: -33751.367410 EM: Round [36] log likelihood: -33751.366440 EM: Round [37] log likelihood: -33751.365572 EM: Round [38] log likelihood: -33751.364791 EM: Round [39] log likelihood: -33751.364084 EM: Round [40] log likelihood: -33751.363441 EM: Round [41] log likelihood: -33751.362854 EM: Round [42] log likelihood: -33751.362315 EM: Round [43] log likelihood: -33751.361817 EM: Round [44] log likelihood: -33751.361357 EM: Round [45] log likelihood: -33751.360929 EM: Round [46] log likelihood: -33751.360529 EM: Round [47] log likelihood: -33751.360156 EM: Round [48] log likelihood: -33751.359806 EM: Round [49] log likelihood: -33751.359476 EM: Round [50] log likelihood: -33751.359166 EM: Round [51] log likelihood: -33751.358872 EM: Round [52] log likelihood: -33751.358595 EM: Round [53] log likelihood: -33751.358332 EM: Round [54] log likelihood: -33751.358083 EM: Round [55] log likelihood: -33751.357846 EM: Round [56] log likelihood: -33751.357620 EM: Round [57] log likelihood: -33751.357406 EM: Round [58] log likelihood: -33751.357201 EM: Round [59] log likelihood: -33751.357006 EM: Round [60] log likelihood: -33751.356820 EM: Round [61] log likelihood: -33751.356643 EM: Round [62] log likelihood: -33751.356473 EM: Round [63] log likelihood: -33751.356311 EM: Round [64] log likelihood: -33751.356156 EM: Round [65] log likelihood: -33751.356008 EM: Round [66] log likelihood: -33751.355866 EM: Round [67] log likelihood: -33751.355730 EM: Round [68] log likelihood: -33751.355600 EM: Round [69] log likelihood: -33751.355475 EM: Round [70] log likelihood: -33751.355356 EM: Round [71] log likelihood: -33751.355242 EM: Round [72] log likelihood: -33751.355133 EM: Round [73] log likelihood: -33751.355028 EM: Round [74] log likelihood: -33751.354927 EM: Round [75] log likelihood: -33751.354831 EM: Stopping iterations at round 75 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 20339008 > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir --annotate /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir -done, see /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 272, filtered: 2221) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.mUade6xaXf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.mUade6xaXf/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000238184.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000280184.2] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000257398.8] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000278399.1] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000287664.1] WARNING, no entry stored in dbm for [ENSG00000225099.1] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000259429.5] WARNING, no entry stored in dbm for [ENSG00000259570.1] WARNING, no entry stored in dbm for [ENSG00000235251.2] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000286176.2] WARNING, no entry stored in dbm for [ENSG00000227091.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000236968.1] WARNING, no entry stored in dbm for [ENSG00000286417.1] WARNING, no entry stored in dbm for [ENSG00000254635.6] WARNING, no entry stored in dbm for [ENSG00000218418.2] WARNING, no entry stored in dbm for [ENSG00000242294.6] WARNING, no entry stored in dbm for [ENSG00000273129.2] WARNING, no entry stored in dbm for [ENSG00000249740.3] WARNING, no entry stored in dbm for [ENSG00000241956.10] WARNING, no entry stored in dbm for [ENSG00000196566.2] WARNING, no entry stored in dbm for [ENSG00000260389.1] WARNING, no entry stored in dbm for [ENSG00000249816.7] WARNING, no entry stored in dbm for [ENSG00000251432.7] WARNING, no entry stored in dbm for [ENSG00000234634.2] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000225465.10] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000228340.6] WARNING, no entry stored in dbm for [ENSG00000223723.1] WARNING, no entry stored in dbm for [ENSG00000251504.1] WARNING, no entry stored in dbm for [ENSG00000273363.1] WARNING, no entry stored in dbm for [ENSG00000251548.1] WARNING, no entry stored in dbm for [ENSG00000285486.1] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000285700.1] WARNING, no entry stored in dbm for [ENSG00000258334.1] WARNING, no entry stored in dbm for [ENSG00000272710.2] WARNING, no entry stored in dbm for [ENSG00000240518.2] WARNING, no entry stored in dbm for [ENSG00000213361.2] WARNING, no entry stored in dbm for [ENSG00000266283.1] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000188850.9] WARNING, no entry stored in dbm for [ENSG00000266535.1] * STAR-Fusion complete. See output: /tmp/nxf.mUade6xaXf/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)