File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/39ee7c5365d153ef7d612afc9e5fc7/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:52:52
                             Started mapping on |	Jun 08 10:59:31
                                    Finished on |	Jun 08 11:58:41
       Mapping speed, Million of reads per hour |	300.26

                          Number of input reads |	296091919
                      Average input read length |	258
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284897912
                        Uniquely mapped reads % |	96.22%
                          Average mapped length |	257.27
                       Number of splices: Total |	319182736
            Number of splices: Annotated (sjdb) |	314043956
                       Number of splices: GT/AG |	315502662
                       Number of splices: GC/AG |	2147703
                       Number of splices: AT/AC |	215136
               Number of splices: Non-canonical |	1317235
                      Mismatch rate per base, % |	0.26%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.05
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.64
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7847555
             % of reads mapped to multiple loci |	2.65%
        Number of reads mapped to too many loci |	350859
             % of reads mapped to too many loci |	0.12%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2645446
                 % of reads unmapped: too short |	0.89%
                Number of reads unmapped: other |	350147
                     % of reads unmapped: other |	0.12%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%