Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/ce6d519292ee81ca90412b9211fe00/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/e8026e4ad8e5d6a0a6c1a1c7381acd/tih_rna_sample_00699_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/ce6d519292ee81ca90412b9211fe00/.command.run ==> STAGING COMPLETE (3 inputs) ls: *.bai: No such file or directory ls: *.csi: No such file or directory