AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 245
Pass (FILTER=PASS): 8 (3.3%)
Fail (FILTER=FAIL): 237 (96.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 84
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 21
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 17
confidence_below_min(low<high): 15
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
Breakdown by confidence:
high: 8 pass, 7 fail (total: 15)
low: 0 pass, 91 fail (total: 91)
medium: 0 pass, 139 fail (total: 139)
Arriba filter: 245 rows -> 8 PASS; wrote tih_rna_sample_00582_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00582_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00582_B23MVV7LT4_1.arriba.fusions.filter_summary.txt