AIH curated blacklist: matched 14 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 418
Pass (FILTER=PASS): 38 (9.1%)
Fail (FILTER=FAIL): 380 (90.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 14
All 14 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 130
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 53
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 25
confidence_below_min(low<high): 23
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 5
Breakdown by confidence:
high: 38 pass, 12 fail (total: 50)
low: 0 pass, 165 fail (total: 165)
medium: 0 pass, 203 fail (total: 203)
Arriba filter: 418 rows -> 38 PASS; wrote tih_rna_sample_00699_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00699_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00699_B23MVV7LT4_1.arriba.fusions.filter_summary.txt